Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trav4n-4A0A075B615 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Trav4n-4A0A075B615 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav4n-4A0A075B615 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav4n-4A0A075B615 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav4n-4A0A075B615 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav4n-4A0A075B615 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trav4n-4A0A075B615 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC13.32□□□□□ -0.28
Trav4n-4A0A075B615 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav4n-4A0A075B615 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav4n-4A0A075B615 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav4n-4A0A075B615 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Trav4n-4A0A075B615 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav4n-4A0A075B615 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav4n-4A0A075B615 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav4n-4A0A075B615 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav4n-4A0A075B615 Gm43702-201ENSMUST00000198772 2546 ntBASIC13.31□□□□□ -0.28
Trav4n-4A0A075B615 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Trav4n-4A0A075B615 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Trav4n-4A0A075B615 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav4n-4A0A075B615 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC13.31□□□□□ -0.28
Trav4n-4A0A075B615 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav4n-4A0A075B615 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav4n-4A0A075B615 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav4n-4A0A075B615 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trav4n-4A0A075B615 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav4n-4A0A075B615 Ddx41-204ENSMUST00000224765 2199 ntBASIC13.31□□□□□ -0.28
Trav4n-4A0A075B615 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav4n-4A0A075B615 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav4n-4A0A075B615 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav4n-4A0A075B615 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav4n-4A0A075B615 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav4n-4A0A075B615 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav4n-4A0A075B615 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav4n-4A0A075B615 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav4n-4A0A075B615 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav4n-4A0A075B615 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Trav4n-4A0A075B615 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav4n-4A0A075B615 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav4n-4A0A075B615 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC13.3□□□□□ -0.28
Trav4n-4A0A075B615 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trav4n-4A0A075B615 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trav4n-4A0A075B615 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav4n-4A0A075B615 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav4n-4A0A075B615 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav4n-4A0A075B615 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav4n-4A0A075B615 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trav4n-4A0A075B615 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav4n-4A0A075B615 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav4n-4A0A075B615 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav4n-4A0A075B615 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC13.29□□□□□ -0.28
Trav4n-4A0A075B615 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav4n-4A0A075B615 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trav4n-4A0A075B615 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav4n-4A0A075B615 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav4n-4A0A075B615 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav4n-4A0A075B615 Gm9939-201ENSMUST00000067161 1154 ntBASIC13.29□□□□□ -0.28
Trav4n-4A0A075B615 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav4n-4A0A075B615 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trav4n-4A0A075B615 Dmtn-210ENSMUST00000228824 2377 ntBASIC13.29□□□□□ -0.28
Trav4n-4A0A075B615 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Trav4n-4A0A075B615 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav4n-4A0A075B615 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav4n-4A0A075B615 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav4n-4A0A075B615 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav4n-4A0A075B615 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav4n-4A0A075B615 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav4n-4A0A075B615 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav4n-4A0A075B615 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav4n-4A0A075B615 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav4n-4A0A075B615 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav4n-4A0A075B615 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav4n-4A0A075B615 Gm42922-201ENSMUST00000195887 2078 ntBASIC13.28□□□□□ -0.28
Trav4n-4A0A075B615 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav4n-4A0A075B615 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav4n-4A0A075B615 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav4n-4A0A075B615 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav4n-4A0A075B615 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav4n-4A0A075B615 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trav4n-4A0A075B615 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav4n-4A0A075B615 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav4n-4A0A075B615 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC13.27□□□□□ -0.28
Trav4n-4A0A075B615 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC13.27□□□□□ -0.28
Trav4n-4A0A075B615 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav4n-4A0A075B615 Dmtn-207ENSMUST00000228001 2437 ntBASIC13.27□□□□□ -0.29
Trav4n-4A0A075B615 Gm11847-201ENSMUST00000125165 1119 ntBASIC13.27□□□□□ -0.29
Trav4n-4A0A075B615 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Trav4n-4A0A075B615 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC13.27□□□□□ -0.29
Trav4n-4A0A075B615 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
Trav4n-4A0A075B615 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav4n-4A0A075B615 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Trav4n-4A0A075B615 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav4n-4A0A075B615 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Trav4n-4A0A075B615 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav4n-4A0A075B615 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Trav4n-4A0A075B615 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC13.27□□□□□ -0.29
Trav4n-4A0A075B615 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav4n-4A0A075B615 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav4n-4A0A075B615 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav4n-4A0A075B615 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms