Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13d-1A0A075B606 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13d-1A0A075B606 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13d-1A0A075B606 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Trav13d-1A0A075B606 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC13.98□□□□□ -0.17
Trav13d-1A0A075B606 Gm26571-201ENSMUST00000181399 666 ntBASIC13.98□□□□□ -0.17
Trav13d-1A0A075B606 Gm7291-201ENSMUST00000199147 382 ntBASIC13.98□□□□□ -0.17
Trav13d-1A0A075B606 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13d-1A0A075B606 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13d-1A0A075B606 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13d-1A0A075B606 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC13.98□□□□□ -0.17
Trav13d-1A0A075B606 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Trav13d-1A0A075B606 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13d-1A0A075B606 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
Trav13d-1A0A075B606 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Trav13d-1A0A075B606 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13d-1A0A075B606 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13d-1A0A075B606 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13d-1A0A075B606 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13d-1A0A075B606 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13d-1A0A075B606 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Trav13d-1A0A075B606 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13d-1A0A075B606 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13d-1A0A075B606 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13d-1A0A075B606 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13d-1A0A075B606 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13d-1A0A075B606 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13d-1A0A075B606 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13d-1A0A075B606 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC13.97□□□□□ -0.17
Trav13d-1A0A075B606 Gm5297-201ENSMUST00000198555 1171 ntBASIC13.97□□□□□ -0.17
Trav13d-1A0A075B606 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC13.97□□□□□ -0.17
Trav13d-1A0A075B606 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13d-1A0A075B606 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC13.97□□□□□ -0.17
Trav13d-1A0A075B606 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13d-1A0A075B606 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC13.97□□□□□ -0.17
Trav13d-1A0A075B606 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13d-1A0A075B606 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13d-1A0A075B606 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13d-1A0A075B606 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13d-1A0A075B606 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13d-1A0A075B606 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13d-1A0A075B606 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav13d-1A0A075B606 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav13d-1A0A075B606 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav13d-1A0A075B606 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC13.96□□□□□ -0.17
Trav13d-1A0A075B606 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav13d-1A0A075B606 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC13.96□□□□□ -0.17
Trav13d-1A0A075B606 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC13.96□□□□□ -0.17
Trav13d-1A0A075B606 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC13.96□□□□□ -0.17
Trav13d-1A0A075B606 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC13.96□□□□□ -0.17
Trav13d-1A0A075B606 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav13d-1A0A075B606 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav13d-1A0A075B606 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC13.96□□□□□ -0.17
Trav13d-1A0A075B606 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC13.96□□□□□ -0.17
Trav13d-1A0A075B606 Gm27801-201ENSMUST00000184174 223 ntBASIC13.96□□□□□ -0.17
Trav13d-1A0A075B606 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav13d-1A0A075B606 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav13d-1A0A075B606 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Trav13d-1A0A075B606 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13d-1A0A075B606 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13d-1A0A075B606 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Trav13d-1A0A075B606 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13d-1A0A075B606 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC13.95□□□□□ -0.18
Trav13d-1A0A075B606 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13d-1A0A075B606 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13d-1A0A075B606 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC13.95□□□□□ -0.18
Trav13d-1A0A075B606 Gm27405-201ENSMUST00000184201 112 ntBASIC13.95□□□□□ -0.18
Trav13d-1A0A075B606 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC13.95□□□□□ -0.18
Trav13d-1A0A075B606 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC13.95□□□□□ -0.18
Trav13d-1A0A075B606 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13d-1A0A075B606 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC13.95□□□□□ -0.18
Trav13d-1A0A075B606 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC13.95□□□□□ -0.18
Trav13d-1A0A075B606 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC13.95□□□□□ -0.18
Trav13d-1A0A075B606 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13d-1A0A075B606 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13d-1A0A075B606 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13d-1A0A075B606 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13d-1A0A075B606 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13d-1A0A075B606 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC13.95□□□□□ -0.18
Trav13d-1A0A075B606 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Trav13d-1A0A075B606 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13d-1A0A075B606 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13d-1A0A075B606 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13d-1A0A075B606 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13d-1A0A075B606 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13d-1A0A075B606 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
Trav13d-1A0A075B606 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Trav13d-1A0A075B606 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13d-1A0A075B606 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13d-1A0A075B606 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Trav13d-1A0A075B606 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13d-1A0A075B606 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Trav13d-1A0A075B606 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13d-1A0A075B606 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13d-1A0A075B606 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13d-1A0A075B606 Gm37035-201ENSMUST00000194809 2148 ntBASIC13.94□□□□□ -0.18
Trav13d-1A0A075B606 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13d-1A0A075B606 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13d-1A0A075B606 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC13.94□□□□□ -0.18
Trav13d-1A0A075B606 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms