Protein–RNA interactions for Protein: Q9D968

Hcfc2, Host cell factor 2, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc2Q9D968 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Hcfc2Q9D968 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Hcfc2Q9D968 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hcfc2Q9D968 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hcfc2Q9D968 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Hcfc2Q9D968 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hcfc2Q9D968 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Hcfc2Q9D968 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hcfc2Q9D968 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hcfc2Q9D968 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hcfc2Q9D968 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC19.01■□□□□ 0.63
Hcfc2Q9D968 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hcfc2Q9D968 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC19■□□□□ 0.63
Hcfc2Q9D968 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Hcfc2Q9D968 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hcfc2Q9D968 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Hcfc2Q9D968 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC18.97■□□□□ 0.63
Hcfc2Q9D968 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Hcfc2Q9D968 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
Hcfc2Q9D968 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hcfc2Q9D968 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Hcfc2Q9D968 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hcfc2Q9D968 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hcfc2Q9D968 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hcfc2Q9D968 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hcfc2Q9D968 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Hcfc2Q9D968 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hcfc2Q9D968 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hcfc2Q9D968 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Hcfc2Q9D968 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hcfc2Q9D968 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hcfc2Q9D968 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC18.9■□□□□ 0.62
Hcfc2Q9D968 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Hcfc2Q9D968 Fezf2-202ENSMUST00000224023 1917 ntBASIC18.88■□□□□ 0.61
Hcfc2Q9D968 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Hcfc2Q9D968 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
Hcfc2Q9D968 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hcfc2Q9D968 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Hcfc2Q9D968 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hcfc2Q9D968 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Hcfc2Q9D968 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hcfc2Q9D968 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC18.81■□□□□ 0.6
Hcfc2Q9D968 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hcfc2Q9D968 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hcfc2Q9D968 AC153890.1-201ENSMUST00000220021 2469 ntBASIC18.8■□□□□ 0.6
Hcfc2Q9D968 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Hcfc2Q9D968 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hcfc2Q9D968 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hcfc2Q9D968 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hcfc2Q9D968 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Hcfc2Q9D968 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hcfc2Q9D968 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hcfc2Q9D968 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hcfc2Q9D968 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hcfc2Q9D968 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Hcfc2Q9D968 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Hcfc2Q9D968 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Hcfc2Q9D968 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hcfc2Q9D968 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hcfc2Q9D968 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Hcfc2Q9D968 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hcfc2Q9D968 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC18.72■□□□□ 0.59
Hcfc2Q9D968 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Hcfc2Q9D968 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hcfc2Q9D968 Gm25262-201ENSMUST00000174934 133 ntBASIC18.71■□□□□ 0.59
Hcfc2Q9D968 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hcfc2Q9D968 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hcfc2Q9D968 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hcfc2Q9D968 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hcfc2Q9D968 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Hcfc2Q9D968 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hcfc2Q9D968 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC18.69■□□□□ 0.58
Hcfc2Q9D968 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Hcfc2Q9D968 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hcfc2Q9D968 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hcfc2Q9D968 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hcfc2Q9D968 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hcfc2Q9D968 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hcfc2Q9D968 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Hcfc2Q9D968 Gm6345-201ENSMUST00000180378 1691 ntBASIC18.66■□□□□ 0.58
Hcfc2Q9D968 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hcfc2Q9D968 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC18.65■□□□□ 0.58
Hcfc2Q9D968 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Hcfc2Q9D968 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hcfc2Q9D968 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hcfc2Q9D968 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Hcfc2Q9D968 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Hcfc2Q9D968 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Hcfc2Q9D968 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC18.62■□□□□ 0.57
Hcfc2Q9D968 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Hcfc2Q9D968 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Hcfc2Q9D968 AC166822.3-201ENSMUST00000227394 661 ntBASIC18.61■□□□□ 0.57
Hcfc2Q9D968 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.6■□□□□ 0.57
Hcfc2Q9D968 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hcfc2Q9D968 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Hcfc2Q9D968 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Hcfc2Q9D968 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hcfc2Q9D968 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Hcfc2Q9D968 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Hcfc2Q9D968 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms