Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC32.18■■■□□ 2.74
Trim34aQ99PP6 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
Trim34aQ99PP6 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC32.17■■■□□ 2.74
Trim34aQ99PP6 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC32.16■■■□□ 2.74
Trim34aQ99PP6 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC32.16■■■□□ 2.74
Trim34aQ99PP6 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
Trim34aQ99PP6 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
Trim34aQ99PP6 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
Trim34aQ99PP6 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC32.13■■■□□ 2.73
Trim34aQ99PP6 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
Trim34aQ99PP6 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
Trim34aQ99PP6 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
Trim34aQ99PP6 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
Trim34aQ99PP6 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC32.08■■■□□ 2.73
Trim34aQ99PP6 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
Trim34aQ99PP6 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
Trim34aQ99PP6 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC32.05■■■□□ 2.72
Trim34aQ99PP6 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
Trim34aQ99PP6 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
Trim34aQ99PP6 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC32.02■■■□□ 2.72
Trim34aQ99PP6 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC32.02■■■□□ 2.72
Trim34aQ99PP6 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC31.99■■■□□ 2.71
Trim34aQ99PP6 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Trim34aQ99PP6 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC31.97■■■□□ 2.71
Trim34aQ99PP6 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
Trim34aQ99PP6 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
Trim34aQ99PP6 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC31.93■■■□□ 2.7
Trim34aQ99PP6 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Trim34aQ99PP6 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Trim34aQ99PP6 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC31.9■■■□□ 2.7
Trim34aQ99PP6 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
Trim34aQ99PP6 Gm43863-201ENSMUST00000203822 1192 ntBASIC31.89■■■□□ 2.7
Trim34aQ99PP6 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Trim34aQ99PP6 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC31.87■■■□□ 2.69
Trim34aQ99PP6 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Trim34aQ99PP6 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Trim34aQ99PP6 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Trim34aQ99PP6 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC31.82■■■□□ 2.68
Trim34aQ99PP6 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Trim34aQ99PP6 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC31.79■■■□□ 2.68
Trim34aQ99PP6 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC31.78■■■□□ 2.68
Trim34aQ99PP6 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC31.78■■■□□ 2.68
Trim34aQ99PP6 Gm9939-201ENSMUST00000067161 1154 ntBASIC31.78■■■□□ 2.68
Trim34aQ99PP6 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC31.76■■■□□ 2.68
Trim34aQ99PP6 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC31.76■■■□□ 2.68
Trim34aQ99PP6 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC31.76■■■□□ 2.68
Trim34aQ99PP6 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
Trim34aQ99PP6 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC31.75■■■□□ 2.67
Trim34aQ99PP6 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
Trim34aQ99PP6 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Trim34aQ99PP6 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
Trim34aQ99PP6 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC31.74■■■□□ 2.67
Trim34aQ99PP6 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC31.74■■■□□ 2.67
Trim34aQ99PP6 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
Trim34aQ99PP6 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC31.71■■■□□ 2.67
Trim34aQ99PP6 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC31.71■■■□□ 2.67
Trim34aQ99PP6 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC31.69■■■□□ 2.66
Trim34aQ99PP6 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC31.68■■■□□ 2.66
Trim34aQ99PP6 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Trim34aQ99PP6 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC31.68■■■□□ 2.66
Trim34aQ99PP6 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
Trim34aQ99PP6 AC157572.2-201ENSMUST00000226970 908 ntBASIC31.66■■■□□ 2.66
Trim34aQ99PP6 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Trim34aQ99PP6 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Trim34aQ99PP6 Gm8503-201ENSMUST00000118131 455 ntBASIC31.62■■■□□ 2.65
Trim34aQ99PP6 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC31.62■■■□□ 2.65
Trim34aQ99PP6 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
Trim34aQ99PP6 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC31.61■■■□□ 2.65
Trim34aQ99PP6 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Trim34aQ99PP6 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
Trim34aQ99PP6 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC31.6■■■□□ 2.65
Trim34aQ99PP6 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC31.59■■■□□ 2.65
Trim34aQ99PP6 Gm6821-201ENSMUST00000107540 542 ntBASIC31.58■■■□□ 2.65
Trim34aQ99PP6 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC31.58■■■□□ 2.65
Trim34aQ99PP6 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC31.57■■■□□ 2.64
Trim34aQ99PP6 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Trim34aQ99PP6 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC31.56■■■□□ 2.64
Trim34aQ99PP6 Gm5987-201ENSMUST00000196433 1151 ntBASIC31.56■■■□□ 2.64
Trim34aQ99PP6 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Trim34aQ99PP6 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
Trim34aQ99PP6 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC31.54■■■□□ 2.64
Trim34aQ99PP6 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
Trim34aQ99PP6 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
Trim34aQ99PP6 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
Trim34aQ99PP6 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC31.53■■■□□ 2.64
Trim34aQ99PP6 Gm2415-204ENSMUST00000190235 2004 ntBASIC31.53■■■□□ 2.64
Trim34aQ99PP6 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Trim34aQ99PP6 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Trim34aQ99PP6 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC31.5■■■□□ 2.63
Trim34aQ99PP6 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Trim34aQ99PP6 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Trim34aQ99PP6 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
Trim34aQ99PP6 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC31.44■■■□□ 2.62
Trim34aQ99PP6 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
Trim34aQ99PP6 Gm30346-201ENSMUST00000218641 1699 ntBASIC31.42■■■□□ 2.62
Trim34aQ99PP6 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC31.42■■■□□ 2.62
Trim34aQ99PP6 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC31.41■■■□□ 2.62
Trim34aQ99PP6 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC31.41■■■□□ 2.62
Trim34aQ99PP6 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
Trim34aQ99PP6 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms