Protein–RNA interactions for Protein: Q8BLA8

Trpa1, Transient receptor potential cation channel subfamily A member 1, mousemouse

Predictions only

Length 1,125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpa1Q8BLA8 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Trpa1Q8BLA8 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Trpa1Q8BLA8 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
Trpa1Q8BLA8 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC26.44■■□□□ 1.82
Trpa1Q8BLA8 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC26.43■■□□□ 1.82
Trpa1Q8BLA8 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
Trpa1Q8BLA8 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC26.42■■□□□ 1.82
Trpa1Q8BLA8 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Trpa1Q8BLA8 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Trpa1Q8BLA8 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC26.41■■□□□ 1.82
Trpa1Q8BLA8 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Trpa1Q8BLA8 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC26.4■■□□□ 1.82
Trpa1Q8BLA8 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
Trpa1Q8BLA8 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Trpa1Q8BLA8 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Trpa1Q8BLA8 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Trpa1Q8BLA8 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.82
Trpa1Q8BLA8 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC26.39■■□□□ 1.82
Trpa1Q8BLA8 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Trpa1Q8BLA8 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Trpa1Q8BLA8 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC26.38■■□□□ 1.81
Trpa1Q8BLA8 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC26.38■■□□□ 1.81
Trpa1Q8BLA8 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Trpa1Q8BLA8 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Trpa1Q8BLA8 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
Trpa1Q8BLA8 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC26.33■■□□□ 1.81
Trpa1Q8BLA8 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Trpa1Q8BLA8 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Trpa1Q8BLA8 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
Trpa1Q8BLA8 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
Trpa1Q8BLA8 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Trpa1Q8BLA8 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Trpa1Q8BLA8 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
Trpa1Q8BLA8 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Trpa1Q8BLA8 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Trpa1Q8BLA8 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Trpa1Q8BLA8 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
Trpa1Q8BLA8 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC26.25■■□□□ 1.79
Trpa1Q8BLA8 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Trpa1Q8BLA8 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Trpa1Q8BLA8 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
Trpa1Q8BLA8 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Trpa1Q8BLA8 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
Trpa1Q8BLA8 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Trpa1Q8BLA8 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
Trpa1Q8BLA8 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
Trpa1Q8BLA8 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Trpa1Q8BLA8 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Trpa1Q8BLA8 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Trpa1Q8BLA8 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Trpa1Q8BLA8 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Trpa1Q8BLA8 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Trpa1Q8BLA8 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.77
Trpa1Q8BLA8 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC26.13■■□□□ 1.77
Trpa1Q8BLA8 Tdp2-203ENSMUST00000223804 1136 ntBASIC26.13■■□□□ 1.77
Trpa1Q8BLA8 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Trpa1Q8BLA8 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Trpa1Q8BLA8 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Trpa1Q8BLA8 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC26.11■■□□□ 1.77
Trpa1Q8BLA8 Gm30346-201ENSMUST00000218641 1699 ntBASIC26.1■■□□□ 1.77
Trpa1Q8BLA8 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC26.1■■□□□ 1.77
Trpa1Q8BLA8 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC26.09■■□□□ 1.77
Trpa1Q8BLA8 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Trpa1Q8BLA8 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Trpa1Q8BLA8 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Trpa1Q8BLA8 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Trpa1Q8BLA8 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC26.06■■□□□ 1.76
Trpa1Q8BLA8 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Trpa1Q8BLA8 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Trpa1Q8BLA8 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Trpa1Q8BLA8 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Trpa1Q8BLA8 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Trpa1Q8BLA8 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
Trpa1Q8BLA8 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Trpa1Q8BLA8 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC26■■□□□ 1.75
Trpa1Q8BLA8 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC26■■□□□ 1.75
Trpa1Q8BLA8 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC26■■□□□ 1.75
Trpa1Q8BLA8 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Trpa1Q8BLA8 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Trpa1Q8BLA8 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC25.99■■□□□ 1.75
Trpa1Q8BLA8 Gm45855-201ENSMUST00000212546 880 ntBASIC25.98■■□□□ 1.75
Trpa1Q8BLA8 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
Trpa1Q8BLA8 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
Trpa1Q8BLA8 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC25.97■■□□□ 1.75
Trpa1Q8BLA8 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC25.97■■□□□ 1.75
Trpa1Q8BLA8 Gm9397-201ENSMUST00000200125 605 ntBASIC25.97■■□□□ 1.75
Trpa1Q8BLA8 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC25.97■■□□□ 1.75
Trpa1Q8BLA8 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC25.96■■□□□ 1.75
Trpa1Q8BLA8 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC25.95■■□□□ 1.74
Trpa1Q8BLA8 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Trpa1Q8BLA8 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC25.95■■□□□ 1.74
Trpa1Q8BLA8 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC25.94■■□□□ 1.74
Trpa1Q8BLA8 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
Trpa1Q8BLA8 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC25.93■■□□□ 1.74
Trpa1Q8BLA8 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Trpa1Q8BLA8 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Trpa1Q8BLA8 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Trpa1Q8BLA8 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC25.91■■□□□ 1.74
Trpa1Q8BLA8 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC25.89■■□□□ 1.74
Trpa1Q8BLA8 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms