Protein–RNA interactions for Protein: Q8BJ37

Tdp1, Tyrosyl-DNA phosphodiesterase 1, mousemouse

Predictions only

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tdp1Q8BJ37 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Tdp1Q8BJ37 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Tdp1Q8BJ37 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC28.86■■■□□ 2.21
Tdp1Q8BJ37 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC28.85■■■□□ 2.21
Tdp1Q8BJ37 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Tdp1Q8BJ37 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
Tdp1Q8BJ37 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC28.85■■■□□ 2.21
Tdp1Q8BJ37 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC28.84■■■□□ 2.21
Tdp1Q8BJ37 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC28.84■■■□□ 2.21
Tdp1Q8BJ37 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
Tdp1Q8BJ37 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Tdp1Q8BJ37 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
Tdp1Q8BJ37 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
Tdp1Q8BJ37 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC28.82■■■□□ 2.2
Tdp1Q8BJ37 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Tdp1Q8BJ37 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC28.77■■■□□ 2.2
Tdp1Q8BJ37 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
Tdp1Q8BJ37 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Tdp1Q8BJ37 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Tdp1Q8BJ37 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Tdp1Q8BJ37 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC28.74■■■□□ 2.19
Tdp1Q8BJ37 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC28.74■■■□□ 2.19
Tdp1Q8BJ37 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
Tdp1Q8BJ37 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC28.69■■■□□ 2.18
Tdp1Q8BJ37 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Tdp1Q8BJ37 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Tdp1Q8BJ37 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Tdp1Q8BJ37 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC28.63■■■□□ 2.17
Tdp1Q8BJ37 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Tdp1Q8BJ37 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
Tdp1Q8BJ37 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Tdp1Q8BJ37 Gm43863-201ENSMUST00000203822 1192 ntBASIC28.59■■■□□ 2.17
Tdp1Q8BJ37 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC28.59■■■□□ 2.17
Tdp1Q8BJ37 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC28.58■■■□□ 2.17
Tdp1Q8BJ37 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Tdp1Q8BJ37 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC28.57■■■□□ 2.16
Tdp1Q8BJ37 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC28.57■■■□□ 2.16
Tdp1Q8BJ37 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Tdp1Q8BJ37 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
Tdp1Q8BJ37 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC28.55■■■□□ 2.16
Tdp1Q8BJ37 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Tdp1Q8BJ37 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC28.53■■■□□ 2.16
Tdp1Q8BJ37 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
Tdp1Q8BJ37 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Tdp1Q8BJ37 Gm9939-201ENSMUST00000067161 1154 ntBASIC28.51■■■□□ 2.15
Tdp1Q8BJ37 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
Tdp1Q8BJ37 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC28.5■■■□□ 2.15
Tdp1Q8BJ37 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC28.5■■■□□ 2.15
Tdp1Q8BJ37 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC28.49■■■□□ 2.15
Tdp1Q8BJ37 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Tdp1Q8BJ37 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC28.48■■■□□ 2.15
Tdp1Q8BJ37 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Tdp1Q8BJ37 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC28.48■■■□□ 2.15
Tdp1Q8BJ37 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
Tdp1Q8BJ37 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC28.47■■■□□ 2.15
Tdp1Q8BJ37 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC28.46■■■□□ 2.15
Tdp1Q8BJ37 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
Tdp1Q8BJ37 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC28.44■■■□□ 2.14
Tdp1Q8BJ37 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC28.42■■■□□ 2.14
Tdp1Q8BJ37 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Tdp1Q8BJ37 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC28.41■■■□□ 2.14
Tdp1Q8BJ37 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC28.41■■■□□ 2.14
Tdp1Q8BJ37 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
Tdp1Q8BJ37 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Tdp1Q8BJ37 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Tdp1Q8BJ37 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
Tdp1Q8BJ37 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Tdp1Q8BJ37 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Tdp1Q8BJ37 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC28.36■■■□□ 2.13
Tdp1Q8BJ37 AC157572.2-201ENSMUST00000226970 908 ntBASIC28.36■■■□□ 2.13
Tdp1Q8BJ37 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Tdp1Q8BJ37 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC28.35■■■□□ 2.13
Tdp1Q8BJ37 Gm8503-201ENSMUST00000118131 455 ntBASIC28.35■■■□□ 2.13
Tdp1Q8BJ37 Gm2415-204ENSMUST00000190235 2004 ntBASIC28.34■■■□□ 2.13
Tdp1Q8BJ37 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC28.33■■■□□ 2.13
Tdp1Q8BJ37 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC28.33■■■□□ 2.13
Tdp1Q8BJ37 Gm5987-201ENSMUST00000196433 1151 ntBASIC28.33■■■□□ 2.13
Tdp1Q8BJ37 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC28.33■■■□□ 2.13
Tdp1Q8BJ37 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC28.32■■■□□ 2.12
Tdp1Q8BJ37 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC28.31■■■□□ 2.12
Tdp1Q8BJ37 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Tdp1Q8BJ37 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC28.29■■■□□ 2.12
Tdp1Q8BJ37 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC28.29■■■□□ 2.12
Tdp1Q8BJ37 Gm6821-201ENSMUST00000107540 542 ntBASIC28.29■■■□□ 2.12
Tdp1Q8BJ37 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC28.29■■■□□ 2.12
Tdp1Q8BJ37 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
Tdp1Q8BJ37 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Tdp1Q8BJ37 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Tdp1Q8BJ37 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC28.26■■■□□ 2.12
Tdp1Q8BJ37 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Tdp1Q8BJ37 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Tdp1Q8BJ37 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC28.24■■■□□ 2.11
Tdp1Q8BJ37 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Tdp1Q8BJ37 Gm30346-201ENSMUST00000218641 1699 ntBASIC28.22■■■□□ 2.11
Tdp1Q8BJ37 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Tdp1Q8BJ37 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
Tdp1Q8BJ37 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Tdp1Q8BJ37 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC28.16■■■□□ 2.1
Tdp1Q8BJ37 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC28.15■■■□□ 2.1
Tdp1Q8BJ37 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms