Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Clns1aQ61189 AL845457.1-201ENSMUST00000197244 68 ntBASIC21.41■■□□□ 1.02
Clns1aQ61189 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC21.4■■□□□ 1.02
Clns1aQ61189 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Clns1aQ61189 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Clns1aQ61189 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Clns1aQ61189 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.38■■□□□ 1.01
Clns1aQ61189 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Clns1aQ61189 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Clns1aQ61189 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Clns1aQ61189 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Clns1aQ61189 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Clns1aQ61189 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Clns1aQ61189 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Clns1aQ61189 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Clns1aQ61189 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Clns1aQ61189 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Clns1aQ61189 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
Clns1aQ61189 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.33■■□□□ 1
Clns1aQ61189 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.32■■□□□ 1
Clns1aQ61189 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Clns1aQ61189 Gm6345-201ENSMUST00000180378 1691 ntBASIC21.29■■□□□ 1
Clns1aQ61189 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Clns1aQ61189 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Clns1aQ61189 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC21.27■■□□□ 1
Clns1aQ61189 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
Clns1aQ61189 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Clns1aQ61189 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Clns1aQ61189 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Clns1aQ61189 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.26■□□□□ 0.99
Clns1aQ61189 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
Clns1aQ61189 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.25■□□□□ 0.99
Clns1aQ61189 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Clns1aQ61189 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Clns1aQ61189 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Clns1aQ61189 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Clns1aQ61189 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC21.22■□□□□ 0.99
Clns1aQ61189 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Clns1aQ61189 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Clns1aQ61189 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Clns1aQ61189 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Clns1aQ61189 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Clns1aQ61189 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Clns1aQ61189 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Clns1aQ61189 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Clns1aQ61189 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Clns1aQ61189 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.19■□□□□ 0.98
Clns1aQ61189 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Clns1aQ61189 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Clns1aQ61189 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Clns1aQ61189 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Clns1aQ61189 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Clns1aQ61189 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Clns1aQ61189 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Clns1aQ61189 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Clns1aQ61189 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Clns1aQ61189 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Clns1aQ61189 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Clns1aQ61189 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Clns1aQ61189 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Clns1aQ61189 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Clns1aQ61189 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Clns1aQ61189 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Clns1aQ61189 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Clns1aQ61189 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Clns1aQ61189 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Clns1aQ61189 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.09■□□□□ 0.97
Clns1aQ61189 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.08■□□□□ 0.97
Clns1aQ61189 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Clns1aQ61189 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Clns1aQ61189 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Clns1aQ61189 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Clns1aQ61189 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Clns1aQ61189 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Clns1aQ61189 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.07■□□□□ 0.96
Clns1aQ61189 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Clns1aQ61189 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Clns1aQ61189 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Clns1aQ61189 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Clns1aQ61189 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Clns1aQ61189 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Clns1aQ61189 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Clns1aQ61189 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Clns1aQ61189 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Clns1aQ61189 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Clns1aQ61189 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Clns1aQ61189 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Clns1aQ61189 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Clns1aQ61189 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Clns1aQ61189 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Clns1aQ61189 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Clns1aQ61189 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21■□□□□ 0.95
Clns1aQ61189 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Clns1aQ61189 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Clns1aQ61189 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Clns1aQ61189 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.98■□□□□ 0.95
Clns1aQ61189 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Clns1aQ61189 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Clns1aQ61189 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Clns1aQ61189 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms