Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.28■□□□□ 0.52
Cks1brtQ3UNC9 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cks1brtQ3UNC9 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cks1brtQ3UNC9 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cks1brtQ3UNC9 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.26■□□□□ 0.51
Cks1brtQ3UNC9 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cks1brtQ3UNC9 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Cks1brtQ3UNC9 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
Cks1brtQ3UNC9 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cks1brtQ3UNC9 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cks1brtQ3UNC9 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cks1brtQ3UNC9 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cks1brtQ3UNC9 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cks1brtQ3UNC9 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
Cks1brtQ3UNC9 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cks1brtQ3UNC9 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cks1brtQ3UNC9 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cks1brtQ3UNC9 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cks1brtQ3UNC9 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cks1brtQ3UNC9 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cks1brtQ3UNC9 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cks1brtQ3UNC9 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.18■□□□□ 0.5
Cks1brtQ3UNC9 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cks1brtQ3UNC9 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cks1brtQ3UNC9 Gm43445-201ENSMUST00000198564 2091 ntBASIC18.17■□□□□ 0.5
Cks1brtQ3UNC9 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cks1brtQ3UNC9 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Cks1brtQ3UNC9 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cks1brtQ3UNC9 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cks1brtQ3UNC9 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cks1brtQ3UNC9 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Cks1brtQ3UNC9 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cks1brtQ3UNC9 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cks1brtQ3UNC9 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cks1brtQ3UNC9 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cks1brtQ3UNC9 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cks1brtQ3UNC9 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Cks1brtQ3UNC9 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cks1brtQ3UNC9 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Cks1brtQ3UNC9 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Cks1brtQ3UNC9 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC18.09■□□□□ 0.49
Cks1brtQ3UNC9 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cks1brtQ3UNC9 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cks1brtQ3UNC9 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cks1brtQ3UNC9 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cks1brtQ3UNC9 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Cks1brtQ3UNC9 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Cks1brtQ3UNC9 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Cks1brtQ3UNC9 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Cks1brtQ3UNC9 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cks1brtQ3UNC9 Zfp131-207ENSMUST00000224946 1783 ntBASIC18.07■□□□□ 0.48
Cks1brtQ3UNC9 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Cks1brtQ3UNC9 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cks1brtQ3UNC9 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cks1brtQ3UNC9 Amer2-203ENSMUST00000225247 2662 ntBASIC18.06■□□□□ 0.48
Cks1brtQ3UNC9 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cks1brtQ3UNC9 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.05■□□□□ 0.48
Cks1brtQ3UNC9 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Cks1brtQ3UNC9 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cks1brtQ3UNC9 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Cks1brtQ3UNC9 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Cks1brtQ3UNC9 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cks1brtQ3UNC9 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cks1brtQ3UNC9 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cks1brtQ3UNC9 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Cks1brtQ3UNC9 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cks1brtQ3UNC9 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Cks1brtQ3UNC9 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Cks1brtQ3UNC9 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cks1brtQ3UNC9 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cks1brtQ3UNC9 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Cks1brtQ3UNC9 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Cks1brtQ3UNC9 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cks1brtQ3UNC9 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cks1brtQ3UNC9 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cks1brtQ3UNC9 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cks1brtQ3UNC9 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Cks1brtQ3UNC9 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cks1brtQ3UNC9 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Cks1brtQ3UNC9 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cks1brtQ3UNC9 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cks1brtQ3UNC9 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Cks1brtQ3UNC9 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC17.94■□□□□ 0.46
Cks1brtQ3UNC9 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cks1brtQ3UNC9 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Cks1brtQ3UNC9 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
Cks1brtQ3UNC9 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Cks1brtQ3UNC9 Fezf2-202ENSMUST00000224023 1917 ntBASIC17.91■□□□□ 0.46
Cks1brtQ3UNC9 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
Cks1brtQ3UNC9 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.9■□□□□ 0.46
Cks1brtQ3UNC9 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cks1brtQ3UNC9 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cks1brtQ3UNC9 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cks1brtQ3UNC9 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cks1brtQ3UNC9 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cks1brtQ3UNC9 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cks1brtQ3UNC9 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Cks1brtQ3UNC9 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC17.88■□□□□ 0.45
Cks1brtQ3UNC9 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Cks1brtQ3UNC9 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 106.6 ms