Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SgcaP82350 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
SgcaP82350 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SgcaP82350 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SgcaP82350 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SgcaP82350 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
SgcaP82350 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
SgcaP82350 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SgcaP82350 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SgcaP82350 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
SgcaP82350 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
SgcaP82350 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SgcaP82350 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SgcaP82350 AL845457.1-201ENSMUST00000197244 68 ntBASIC20.86■□□□□ 0.93
SgcaP82350 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC20.86■□□□□ 0.93
SgcaP82350 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SgcaP82350 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
SgcaP82350 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SgcaP82350 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SgcaP82350 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SgcaP82350 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SgcaP82350 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SgcaP82350 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SgcaP82350 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SgcaP82350 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
SgcaP82350 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
SgcaP82350 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SgcaP82350 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SgcaP82350 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
SgcaP82350 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SgcaP82350 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SgcaP82350 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SgcaP82350 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.74■□□□□ 0.91
SgcaP82350 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SgcaP82350 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
SgcaP82350 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.73■□□□□ 0.91
SgcaP82350 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SgcaP82350 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
SgcaP82350 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
SgcaP82350 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SgcaP82350 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC20.71■□□□□ 0.91
SgcaP82350 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.91
SgcaP82350 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.7■□□□□ 0.9
SgcaP82350 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SgcaP82350 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SgcaP82350 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SgcaP82350 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.68■□□□□ 0.9
SgcaP82350 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SgcaP82350 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SgcaP82350 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SgcaP82350 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SgcaP82350 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.67■□□□□ 0.9
SgcaP82350 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SgcaP82350 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.65■□□□□ 0.9
SgcaP82350 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SgcaP82350 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.63■□□□□ 0.89
SgcaP82350 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SgcaP82350 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
SgcaP82350 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.62■□□□□ 0.89
SgcaP82350 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SgcaP82350 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SgcaP82350 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SgcaP82350 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SgcaP82350 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SgcaP82350 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SgcaP82350 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
SgcaP82350 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SgcaP82350 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
SgcaP82350 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
SgcaP82350 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SgcaP82350 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
SgcaP82350 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
SgcaP82350 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SgcaP82350 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SgcaP82350 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SgcaP82350 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SgcaP82350 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SgcaP82350 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SgcaP82350 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SgcaP82350 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SgcaP82350 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
SgcaP82350 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SgcaP82350 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
SgcaP82350 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.53■□□□□ 0.88
SgcaP82350 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SgcaP82350 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SgcaP82350 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SgcaP82350 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SgcaP82350 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SgcaP82350 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SgcaP82350 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SgcaP82350 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.51■□□□□ 0.87
SgcaP82350 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SgcaP82350 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SgcaP82350 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SgcaP82350 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
SgcaP82350 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SgcaP82350 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SgcaP82350 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SgcaP82350 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 9.9 ms