Protein–RNA interactions for Protein: P63054

Pcp4, Calmodulin regulator protein PCP4, mousemouse

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcp4P63054 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcp4P63054 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcp4P63054 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC17.43■□□□□ 0.38
Pcp4P63054 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Pcp4P63054 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcp4P63054 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Pcp4P63054 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcp4P63054 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcp4P63054 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC17.4■□□□□ 0.38
Pcp4P63054 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pcp4P63054 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcp4P63054 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Pcp4P63054 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Pcp4P63054 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pcp4P63054 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcp4P63054 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcp4P63054 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcp4P63054 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcp4P63054 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcp4P63054 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcp4P63054 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Pcp4P63054 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcp4P63054 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcp4P63054 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC17.36■□□□□ 0.37
Pcp4P63054 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcp4P63054 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Pcp4P63054 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcp4P63054 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcp4P63054 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcp4P63054 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcp4P63054 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
Pcp4P63054 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcp4P63054 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcp4P63054 Gm6206-201ENSMUST00000133472 2199 ntBASIC17.32■□□□□ 0.36
Pcp4P63054 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcp4P63054 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Pcp4P63054 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Pcp4P63054 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pcp4P63054 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pcp4P63054 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC17.31■□□□□ 0.36
Pcp4P63054 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.31■□□□□ 0.36
Pcp4P63054 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Pcp4P63054 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcp4P63054 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcp4P63054 Notumos-201ENSMUST00000151998 2659 ntBASIC17.3■□□□□ 0.36
Pcp4P63054 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Pcp4P63054 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcp4P63054 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcp4P63054 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Pcp4P63054 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Pcp4P63054 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcp4P63054 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Pcp4P63054 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcp4P63054 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcp4P63054 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcp4P63054 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Pcp4P63054 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcp4P63054 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcp4P63054 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcp4P63054 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcp4P63054 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcp4P63054 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Pcp4P63054 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Pcp4P63054 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
Pcp4P63054 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
Pcp4P63054 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcp4P63054 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcp4P63054 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcp4P63054 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcp4P63054 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Pcp4P63054 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Pcp4P63054 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcp4P63054 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Pcp4P63054 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcp4P63054 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcp4P63054 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcp4P63054 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
Pcp4P63054 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcp4P63054 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcp4P63054 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
Pcp4P63054 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcp4P63054 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcp4P63054 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcp4P63054 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Pcp4P63054 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
Pcp4P63054 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcp4P63054 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcp4P63054 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.12■□□□□ 0.33
Pcp4P63054 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcp4P63054 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcp4P63054 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcp4P63054 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcp4P63054 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Pcp4P63054 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcp4P63054 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Pcp4P63054 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcp4P63054 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Pcp4P63054 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcp4P63054 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcp4P63054 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms