Protein–RNA interactions for Protein: P01853

T-cell receptor gamma chain C region C10.5, mousemouse

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01853 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.16■□□□□ 0.66
P01853 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
P01853 Gm6345-201ENSMUST00000180378 1691 ntBASIC19.15■□□□□ 0.66
P01853 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
P01853 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
P01853 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC19.14■□□□□ 0.65
P01853 AL845457.1-201ENSMUST00000197244 68 ntBASIC19.14■□□□□ 0.65
P01853 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
P01853 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC19.12■□□□□ 0.65
P01853 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
P01853 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
P01853 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC19.1■□□□□ 0.65
P01853 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
P01853 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
P01853 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
P01853 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
P01853 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
P01853 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
P01853 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
P01853 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
P01853 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
P01853 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
P01853 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
P01853 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
P01853 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
P01853 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
P01853 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
P01853 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC19.04■□□□□ 0.64
P01853 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
P01853 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
P01853 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
P01853 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
P01853 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
P01853 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
P01853 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
P01853 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
P01853 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
P01853 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC19.01■□□□□ 0.63
P01853 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
P01853 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19■□□□□ 0.63
P01853 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
P01853 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
P01853 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
P01853 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
P01853 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
P01853 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
P01853 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
P01853 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
P01853 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
P01853 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
P01853 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
P01853 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
P01853 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
P01853 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC18.94■□□□□ 0.62
P01853 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
P01853 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
P01853 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
P01853 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
P01853 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
P01853 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
P01853 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
P01853 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
P01853 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
P01853 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
P01853 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
P01853 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
P01853 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
P01853 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
P01853 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
P01853 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC18.89■□□□□ 0.61
P01853 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
P01853 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
P01853 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC18.88■□□□□ 0.61
P01853 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
P01853 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC18.88■□□□□ 0.61
P01853 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
P01853 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
P01853 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC18.87■□□□□ 0.61
P01853 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
P01853 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
P01853 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
P01853 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
P01853 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
P01853 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
P01853 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
P01853 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
P01853 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
P01853 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC18.84■□□□□ 0.61
P01853 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
P01853 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
P01853 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
P01853 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
P01853 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
P01853 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
P01853 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
P01853 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
P01853 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.79■□□□□ 0.6
P01853 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
P01853 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
P01853 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms