Protein–RNA interactions for Protein: J3QPR6

Rfpl4b, MCG1377, mousemouse

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfpl4bJ3QPR6 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
Rfpl4bJ3QPR6 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
Rfpl4bJ3QPR6 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC29.86■■■□□ 2.37
Rfpl4bJ3QPR6 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC29.84■■■□□ 2.37
Rfpl4bJ3QPR6 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC29.84■■■□□ 2.37
Rfpl4bJ3QPR6 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
Rfpl4bJ3QPR6 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Rfpl4bJ3QPR6 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Rfpl4bJ3QPR6 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC29.8■■■□□ 2.36
Rfpl4bJ3QPR6 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Rfpl4bJ3QPR6 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC29.79■■■□□ 2.36
Rfpl4bJ3QPR6 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC29.78■■■□□ 2.36
Rfpl4bJ3QPR6 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
Rfpl4bJ3QPR6 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC29.77■■■□□ 2.36
Rfpl4bJ3QPR6 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
Rfpl4bJ3QPR6 Gm9939-201ENSMUST00000067161 1154 ntBASIC29.76■■■□□ 2.35
Rfpl4bJ3QPR6 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC29.75■■■□□ 2.35
Rfpl4bJ3QPR6 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Rfpl4bJ3QPR6 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC29.72■■■□□ 2.35
Rfpl4bJ3QPR6 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC29.71■■■□□ 2.35
Rfpl4bJ3QPR6 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
Rfpl4bJ3QPR6 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
Rfpl4bJ3QPR6 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Rfpl4bJ3QPR6 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC29.66■■■□□ 2.34
Rfpl4bJ3QPR6 Gm8503-201ENSMUST00000118131 455 ntBASIC29.65■■■□□ 2.34
Rfpl4bJ3QPR6 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC29.65■■■□□ 2.34
Rfpl4bJ3QPR6 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
Rfpl4bJ3QPR6 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
Rfpl4bJ3QPR6 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC29.62■■■□□ 2.33
Rfpl4bJ3QPR6 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
Rfpl4bJ3QPR6 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC29.6■■■□□ 2.33
Rfpl4bJ3QPR6 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC29.6■■■□□ 2.33
Rfpl4bJ3QPR6 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Rfpl4bJ3QPR6 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Rfpl4bJ3QPR6 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
Rfpl4bJ3QPR6 Gm43863-201ENSMUST00000203822 1192 ntBASIC29.56■■■□□ 2.32
Rfpl4bJ3QPR6 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC29.55■■■□□ 2.32
Rfpl4bJ3QPR6 Gm6821-201ENSMUST00000107540 542 ntBASIC29.55■■■□□ 2.32
Rfpl4bJ3QPR6 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC29.54■■■□□ 2.32
Rfpl4bJ3QPR6 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC29.54■■■□□ 2.32
Rfpl4bJ3QPR6 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
Rfpl4bJ3QPR6 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC29.51■■■□□ 2.31
Rfpl4bJ3QPR6 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
Rfpl4bJ3QPR6 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC29.49■■■□□ 2.31
Rfpl4bJ3QPR6 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
Rfpl4bJ3QPR6 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
Rfpl4bJ3QPR6 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
Rfpl4bJ3QPR6 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC29.44■■■□□ 2.3
Rfpl4bJ3QPR6 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC29.44■■■□□ 2.3
Rfpl4bJ3QPR6 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Rfpl4bJ3QPR6 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
Rfpl4bJ3QPR6 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC29.43■■■□□ 2.3
Rfpl4bJ3QPR6 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC29.43■■■□□ 2.3
Rfpl4bJ3QPR6 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Rfpl4bJ3QPR6 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Rfpl4bJ3QPR6 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Rfpl4bJ3QPR6 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC29.41■■■□□ 2.3
Rfpl4bJ3QPR6 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC29.4■■■□□ 2.3
Rfpl4bJ3QPR6 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
Rfpl4bJ3QPR6 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC29.39■■■□□ 2.3
Rfpl4bJ3QPR6 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC29.39■■■□□ 2.3
Rfpl4bJ3QPR6 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC29.38■■■□□ 2.29
Rfpl4bJ3QPR6 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC29.37■■■□□ 2.29
Rfpl4bJ3QPR6 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
Rfpl4bJ3QPR6 AC157572.2-201ENSMUST00000226970 908 ntBASIC29.32■■■□□ 2.28
Rfpl4bJ3QPR6 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Rfpl4bJ3QPR6 Gm2415-204ENSMUST00000190235 2004 ntBASIC29.32■■■□□ 2.28
Rfpl4bJ3QPR6 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
Rfpl4bJ3QPR6 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC29.31■■■□□ 2.28
Rfpl4bJ3QPR6 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
Rfpl4bJ3QPR6 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC29.31■■■□□ 2.28
Rfpl4bJ3QPR6 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC29.31■■■□□ 2.28
Rfpl4bJ3QPR6 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Rfpl4bJ3QPR6 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Rfpl4bJ3QPR6 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC29.26■■■□□ 2.27
Rfpl4bJ3QPR6 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC29.25■■■□□ 2.27
Rfpl4bJ3QPR6 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Rfpl4bJ3QPR6 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC29.22■■■□□ 2.27
Rfpl4bJ3QPR6 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Rfpl4bJ3QPR6 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC29.21■■■□□ 2.27
Rfpl4bJ3QPR6 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC29.21■■■□□ 2.27
Rfpl4bJ3QPR6 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC29.2■■■□□ 2.26
Rfpl4bJ3QPR6 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC29.2■■■□□ 2.26
Rfpl4bJ3QPR6 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Rfpl4bJ3QPR6 Gm42809-201ENSMUST00000198429 1138 ntBASIC29.19■■■□□ 2.26
Rfpl4bJ3QPR6 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Rfpl4bJ3QPR6 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Rfpl4bJ3QPR6 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
Rfpl4bJ3QPR6 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Rfpl4bJ3QPR6 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Rfpl4bJ3QPR6 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Rfpl4bJ3QPR6 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Rfpl4bJ3QPR6 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC29.15■■■□□ 2.26
Rfpl4bJ3QPR6 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
Rfpl4bJ3QPR6 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.25
Rfpl4bJ3QPR6 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC29.13■■■□□ 2.25
Rfpl4bJ3QPR6 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC29.11■■■□□ 2.25
Rfpl4bJ3QPR6 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
Rfpl4bJ3QPR6 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
Rfpl4bJ3QPR6 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC29.07■■■□□ 2.24
Retrieved 100 of 76,532 protein–RNA pairs in 10 ms