Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC29.61■■■□□ 2.33
B020004C17RikJ3QP07 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
B020004C17RikJ3QP07 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC29.53■■■□□ 2.32
B020004C17RikJ3QP07 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
B020004C17RikJ3QP07 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC29.52■■■□□ 2.32
B020004C17RikJ3QP07 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
B020004C17RikJ3QP07 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
B020004C17RikJ3QP07 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC29.5■■■□□ 2.31
B020004C17RikJ3QP07 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
B020004C17RikJ3QP07 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC29.49■■■□□ 2.31
B020004C17RikJ3QP07 Gm5987-201ENSMUST00000196433 1151 ntBASIC29.49■■■□□ 2.31
B020004C17RikJ3QP07 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC29.49■■■□□ 2.31
B020004C17RikJ3QP07 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC29.48■■■□□ 2.31
B020004C17RikJ3QP07 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
B020004C17RikJ3QP07 Gm9939-201ENSMUST00000067161 1154 ntBASIC29.47■■■□□ 2.31
B020004C17RikJ3QP07 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
B020004C17RikJ3QP07 Gm43863-201ENSMUST00000203822 1192 ntBASIC29.43■■■□□ 2.3
B020004C17RikJ3QP07 Gm8503-201ENSMUST00000118131 455 ntBASIC29.42■■■□□ 2.3
B020004C17RikJ3QP07 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC29.41■■■□□ 2.3
B020004C17RikJ3QP07 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
B020004C17RikJ3QP07 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC29.4■■■□□ 2.3
B020004C17RikJ3QP07 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC29.38■■■□□ 2.29
B020004C17RikJ3QP07 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC29.38■■■□□ 2.29
B020004C17RikJ3QP07 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
B020004C17RikJ3QP07 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC29.38■■■□□ 2.29
B020004C17RikJ3QP07 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
B020004C17RikJ3QP07 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
B020004C17RikJ3QP07 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
B020004C17RikJ3QP07 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
B020004C17RikJ3QP07 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC29.36■■■□□ 2.29
B020004C17RikJ3QP07 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC29.33■■■□□ 2.29
B020004C17RikJ3QP07 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
B020004C17RikJ3QP07 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
B020004C17RikJ3QP07 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC29.32■■■□□ 2.28
B020004C17RikJ3QP07 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC29.31■■■□□ 2.28
B020004C17RikJ3QP07 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
B020004C17RikJ3QP07 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC29.29■■■□□ 2.28
B020004C17RikJ3QP07 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC29.28■■■□□ 2.28
B020004C17RikJ3QP07 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
B020004C17RikJ3QP07 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
B020004C17RikJ3QP07 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
B020004C17RikJ3QP07 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC29.25■■■□□ 2.27
B020004C17RikJ3QP07 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC29.25■■■□□ 2.27
B020004C17RikJ3QP07 Gm6821-201ENSMUST00000107540 542 ntBASIC29.24■■■□□ 2.27
B020004C17RikJ3QP07 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
B020004C17RikJ3QP07 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC29.23■■■□□ 2.27
B020004C17RikJ3QP07 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
B020004C17RikJ3QP07 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
B020004C17RikJ3QP07 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC29.21■■■□□ 2.27
B020004C17RikJ3QP07 AC157572.2-201ENSMUST00000226970 908 ntBASIC29.2■■■□□ 2.26
B020004C17RikJ3QP07 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC29.19■■■□□ 2.26
B020004C17RikJ3QP07 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
B020004C17RikJ3QP07 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC29.18■■■□□ 2.26
B020004C17RikJ3QP07 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC29.17■■■□□ 2.26
B020004C17RikJ3QP07 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC29.16■■■□□ 2.26
B020004C17RikJ3QP07 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
B020004C17RikJ3QP07 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
B020004C17RikJ3QP07 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
B020004C17RikJ3QP07 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC29.14■■■□□ 2.26
B020004C17RikJ3QP07 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC29.14■■■□□ 2.25
B020004C17RikJ3QP07 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC29.1■■■□□ 2.25
B020004C17RikJ3QP07 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
B020004C17RikJ3QP07 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
B020004C17RikJ3QP07 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC29.09■■■□□ 2.25
B020004C17RikJ3QP07 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
B020004C17RikJ3QP07 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
B020004C17RikJ3QP07 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC29.06■■■□□ 2.24
B020004C17RikJ3QP07 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
B020004C17RikJ3QP07 Gm42809-201ENSMUST00000198429 1138 ntBASIC29.02■■■□□ 2.24
B020004C17RikJ3QP07 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC29.02■■■□□ 2.24
B020004C17RikJ3QP07 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
B020004C17RikJ3QP07 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.24
B020004C17RikJ3QP07 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC29.01■■■□□ 2.23
B020004C17RikJ3QP07 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC29■■■□□ 2.23
B020004C17RikJ3QP07 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC29■■■□□ 2.23
B020004C17RikJ3QP07 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
B020004C17RikJ3QP07 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
B020004C17RikJ3QP07 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC28.99■■■□□ 2.23
B020004C17RikJ3QP07 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC28.99■■■□□ 2.23
B020004C17RikJ3QP07 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
B020004C17RikJ3QP07 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC28.98■■■□□ 2.23
B020004C17RikJ3QP07 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC28.97■■■□□ 2.23
B020004C17RikJ3QP07 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC28.97■■■□□ 2.23
B020004C17RikJ3QP07 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC28.97■■■□□ 2.23
B020004C17RikJ3QP07 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
B020004C17RikJ3QP07 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC28.96■■■□□ 2.23
B020004C17RikJ3QP07 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC28.95■■■□□ 2.23
B020004C17RikJ3QP07 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC28.95■■■□□ 2.22
B020004C17RikJ3QP07 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC28.93■■■□□ 2.22
B020004C17RikJ3QP07 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
B020004C17RikJ3QP07 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC28.92■■■□□ 2.22
B020004C17RikJ3QP07 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
B020004C17RikJ3QP07 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC28.91■■■□□ 2.22
B020004C17RikJ3QP07 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC28.9■■■□□ 2.22
B020004C17RikJ3QP07 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
B020004C17RikJ3QP07 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.9■■■□□ 2.22
B020004C17RikJ3QP07 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
B020004C17RikJ3QP07 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC28.89■■■□□ 2.21
B020004C17RikJ3QP07 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
B020004C17RikJ3QP07 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC28.88■■■□□ 2.21
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms