Protein–RNA interactions for Protein: J3QM54

Gm3727, Predicted gene 3727, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3727J3QM54 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1
Gm3727J3QM54 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Gm3727J3QM54 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.32■■□□□ 1
Gm3727J3QM54 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Gm3727J3QM54 Mipep-204ENSMUST00000225043 1548 ntBASIC21.31■■□□□ 1
Gm3727J3QM54 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Gm3727J3QM54 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC21.31■■□□□ 1
Gm3727J3QM54 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Gm3727J3QM54 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
Gm3727J3QM54 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Gm3727J3QM54 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Gm3727J3QM54 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Gm3727J3QM54 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gm3727J3QM54 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gm3727J3QM54 Gm6345-201ENSMUST00000180378 1691 ntBASIC21.28■■□□□ 1
Gm3727J3QM54 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Gm3727J3QM54 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm3727J3QM54 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gm3727J3QM54 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Gm3727J3QM54 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Gm3727J3QM54 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC21.25■□□□□ 0.99
Gm3727J3QM54 Gm25238-201ENSMUST00000174914 89 ntBASIC21.25■□□□□ 0.99
Gm3727J3QM54 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Gm3727J3QM54 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Gm3727J3QM54 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Gm3727J3QM54 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Gm3727J3QM54 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Gm3727J3QM54 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.21■□□□□ 0.99
Gm3727J3QM54 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm3727J3QM54 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Gm3727J3QM54 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm3727J3QM54 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Gm3727J3QM54 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Gm3727J3QM54 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.18■□□□□ 0.98
Gm3727J3QM54 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Gm3727J3QM54 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm3727J3QM54 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.17■□□□□ 0.98
Gm3727J3QM54 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm3727J3QM54 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
Gm3727J3QM54 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.17■□□□□ 0.98
Gm3727J3QM54 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Gm3727J3QM54 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gm3727J3QM54 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Gm3727J3QM54 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gm3727J3QM54 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gm3727J3QM54 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gm3727J3QM54 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Gm3727J3QM54 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Gm3727J3QM54 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC21.14■□□□□ 0.97
Gm3727J3QM54 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Gm3727J3QM54 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Gm3727J3QM54 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gm3727J3QM54 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gm3727J3QM54 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC21.13■□□□□ 0.97
Gm3727J3QM54 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gm3727J3QM54 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gm3727J3QM54 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gm3727J3QM54 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Gm3727J3QM54 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Gm3727J3QM54 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Gm3727J3QM54 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.08■□□□□ 0.97
Gm3727J3QM54 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Gm3727J3QM54 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Gm3727J3QM54 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Gm3727J3QM54 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Gm3727J3QM54 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gm3727J3QM54 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Gm3727J3QM54 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gm3727J3QM54 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gm3727J3QM54 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Gm3727J3QM54 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.06■□□□□ 0.96
Gm3727J3QM54 AL845457.1-201ENSMUST00000197244 68 ntBASIC21.06■□□□□ 0.96
Gm3727J3QM54 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Gm3727J3QM54 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gm3727J3QM54 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Gm3727J3QM54 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gm3727J3QM54 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Gm3727J3QM54 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gm3727J3QM54 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Gm3727J3QM54 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Gm3727J3QM54 Rab21-202ENSMUST00000218831 843 ntBASIC21.02■□□□□ 0.96
Gm3727J3QM54 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Gm3727J3QM54 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Gm3727J3QM54 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
Gm3727J3QM54 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21■□□□□ 0.95
Gm3727J3QM54 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Gm3727J3QM54 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Gm3727J3QM54 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Gm3727J3QM54 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gm3727J3QM54 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gm3727J3QM54 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Gm3727J3QM54 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Gm3727J3QM54 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gm3727J3QM54 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gm3727J3QM54 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gm3727J3QM54 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gm3727J3QM54 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gm3727J3QM54 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
Gm3727J3QM54 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Gm3727J3QM54 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms