Protein–RNA interactions for Protein: D3YXE9

BC048679, cDNA sequence BC048679, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC048679D3YXE9 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
BC048679D3YXE9 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
BC048679D3YXE9 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
BC048679D3YXE9 AC166822.3-201ENSMUST00000227394 661 ntBASIC20.9■□□□□ 0.94
BC048679D3YXE9 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
BC048679D3YXE9 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
BC048679D3YXE9 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
BC048679D3YXE9 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BC048679D3YXE9 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
BC048679D3YXE9 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
BC048679D3YXE9 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
BC048679D3YXE9 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
BC048679D3YXE9 Gm17082-201ENSMUST00000166043 1091 ntBASIC20.87■□□□□ 0.93
BC048679D3YXE9 Gm27322-201ENSMUST00000184007 104 ntBASIC20.87■□□□□ 0.93
BC048679D3YXE9 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
BC048679D3YXE9 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
BC048679D3YXE9 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
BC048679D3YXE9 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
BC048679D3YXE9 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
BC048679D3YXE9 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
BC048679D3YXE9 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
BC048679D3YXE9 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
BC048679D3YXE9 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
BC048679D3YXE9 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
BC048679D3YXE9 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
BC048679D3YXE9 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
BC048679D3YXE9 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
BC048679D3YXE9 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
BC048679D3YXE9 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
BC048679D3YXE9 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
BC048679D3YXE9 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
BC048679D3YXE9 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
BC048679D3YXE9 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BC048679D3YXE9 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC20.81■□□□□ 0.92
BC048679D3YXE9 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
BC048679D3YXE9 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
BC048679D3YXE9 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
BC048679D3YXE9 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
BC048679D3YXE9 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
BC048679D3YXE9 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
BC048679D3YXE9 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC20.79■□□□□ 0.92
BC048679D3YXE9 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
BC048679D3YXE9 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
BC048679D3YXE9 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
BC048679D3YXE9 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
BC048679D3YXE9 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
BC048679D3YXE9 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
BC048679D3YXE9 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
BC048679D3YXE9 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
BC048679D3YXE9 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
BC048679D3YXE9 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.73■□□□□ 0.91
BC048679D3YXE9 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.72■□□□□ 0.91
BC048679D3YXE9 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
BC048679D3YXE9 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
BC048679D3YXE9 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC20.71■□□□□ 0.91
BC048679D3YXE9 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC20.71■□□□□ 0.91
BC048679D3YXE9 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
BC048679D3YXE9 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
BC048679D3YXE9 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
BC048679D3YXE9 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BC048679D3YXE9 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
BC048679D3YXE9 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC20.7■□□□□ 0.9
BC048679D3YXE9 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.69■□□□□ 0.9
BC048679D3YXE9 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BC048679D3YXE9 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
BC048679D3YXE9 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BC048679D3YXE9 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BC048679D3YXE9 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BC048679D3YXE9 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BC048679D3YXE9 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
BC048679D3YXE9 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BC048679D3YXE9 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BC048679D3YXE9 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
BC048679D3YXE9 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BC048679D3YXE9 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BC048679D3YXE9 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
BC048679D3YXE9 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.65■□□□□ 0.9
BC048679D3YXE9 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC20.64■□□□□ 0.9
BC048679D3YXE9 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BC048679D3YXE9 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
BC048679D3YXE9 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
BC048679D3YXE9 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
BC048679D3YXE9 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
BC048679D3YXE9 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
BC048679D3YXE9 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
BC048679D3YXE9 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.6■□□□□ 0.89
BC048679D3YXE9 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
BC048679D3YXE9 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.59■□□□□ 0.89
BC048679D3YXE9 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
BC048679D3YXE9 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
BC048679D3YXE9 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.58■□□□□ 0.88
BC048679D3YXE9 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BC048679D3YXE9 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
BC048679D3YXE9 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
BC048679D3YXE9 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
BC048679D3YXE9 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BC048679D3YXE9 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BC048679D3YXE9 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC20.55■□□□□ 0.88
BC048679D3YXE9 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
BC048679D3YXE9 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 177.9 ms