Protein–RNA interactions for Protein: A0A0B4J1H5

Trbv20, T cell receptor beta, variable 20 (Fragment), mousemouse

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv20A0A0B4J1H5 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Trbv20A0A0B4J1H5 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Trbv20A0A0B4J1H5 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC22.65■■□□□ 1.22
Trbv20A0A0B4J1H5 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Trbv20A0A0B4J1H5 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Trbv20A0A0B4J1H5 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
Trbv20A0A0B4J1H5 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
Trbv20A0A0B4J1H5 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
Trbv20A0A0B4J1H5 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Trbv20A0A0B4J1H5 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
Trbv20A0A0B4J1H5 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Trbv20A0A0B4J1H5 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Trbv20A0A0B4J1H5 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Trbv20A0A0B4J1H5 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
Trbv20A0A0B4J1H5 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
Trbv20A0A0B4J1H5 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC22.61■■□□□ 1.21
Trbv20A0A0B4J1H5 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Trbv20A0A0B4J1H5 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Trbv20A0A0B4J1H5 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Trbv20A0A0B4J1H5 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Trbv20A0A0B4J1H5 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC22.58■■□□□ 1.21
Trbv20A0A0B4J1H5 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Trbv20A0A0B4J1H5 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Trbv20A0A0B4J1H5 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Trbv20A0A0B4J1H5 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Trbv20A0A0B4J1H5 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC22.55■■□□□ 1.2
Trbv20A0A0B4J1H5 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
Trbv20A0A0B4J1H5 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC22.54■■□□□ 1.2
Trbv20A0A0B4J1H5 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Trbv20A0A0B4J1H5 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Trbv20A0A0B4J1H5 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
Trbv20A0A0B4J1H5 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Trbv20A0A0B4J1H5 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC22.5■■□□□ 1.19
Trbv20A0A0B4J1H5 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Trbv20A0A0B4J1H5 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trbv20A0A0B4J1H5 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trbv20A0A0B4J1H5 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Trbv20A0A0B4J1H5 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trbv20A0A0B4J1H5 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC22.47■■□□□ 1.19
Trbv20A0A0B4J1H5 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
Trbv20A0A0B4J1H5 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Trbv20A0A0B4J1H5 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Trbv20A0A0B4J1H5 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Trbv20A0A0B4J1H5 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Trbv20A0A0B4J1H5 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Trbv20A0A0B4J1H5 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Trbv20A0A0B4J1H5 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC22.45■■□□□ 1.18
Trbv20A0A0B4J1H5 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Trbv20A0A0B4J1H5 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Trbv20A0A0B4J1H5 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Trbv20A0A0B4J1H5 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Trbv20A0A0B4J1H5 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Trbv20A0A0B4J1H5 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Trbv20A0A0B4J1H5 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC22.42■■□□□ 1.18
Trbv20A0A0B4J1H5 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC22.41■■□□□ 1.18
Trbv20A0A0B4J1H5 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Trbv20A0A0B4J1H5 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
Trbv20A0A0B4J1H5 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Trbv20A0A0B4J1H5 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Trbv20A0A0B4J1H5 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Trbv20A0A0B4J1H5 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Trbv20A0A0B4J1H5 AC153890.1-201ENSMUST00000220021 2469 ntBASIC22.38■■□□□ 1.17
Trbv20A0A0B4J1H5 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
Trbv20A0A0B4J1H5 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Trbv20A0A0B4J1H5 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Trbv20A0A0B4J1H5 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Trbv20A0A0B4J1H5 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Trbv20A0A0B4J1H5 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Trbv20A0A0B4J1H5 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Trbv20A0A0B4J1H5 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Trbv20A0A0B4J1H5 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
Trbv20A0A0B4J1H5 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Trbv20A0A0B4J1H5 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Trbv20A0A0B4J1H5 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Trbv20A0A0B4J1H5 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Trbv20A0A0B4J1H5 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Trbv20A0A0B4J1H5 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Trbv20A0A0B4J1H5 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
Trbv20A0A0B4J1H5 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Trbv20A0A0B4J1H5 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Trbv20A0A0B4J1H5 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Trbv20A0A0B4J1H5 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Trbv20A0A0B4J1H5 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Trbv20A0A0B4J1H5 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC22.3■■□□□ 1.16
Trbv20A0A0B4J1H5 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trbv20A0A0B4J1H5 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trbv20A0A0B4J1H5 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Trbv20A0A0B4J1H5 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Trbv20A0A0B4J1H5 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Trbv20A0A0B4J1H5 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Trbv20A0A0B4J1H5 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Trbv20A0A0B4J1H5 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC22.24■■□□□ 1.15
Trbv20A0A0B4J1H5 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Trbv20A0A0B4J1H5 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Trbv20A0A0B4J1H5 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Trbv20A0A0B4J1H5 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Trbv20A0A0B4J1H5 Gm30346-201ENSMUST00000218641 1699 ntBASIC22.21■■□□□ 1.15
Trbv20A0A0B4J1H5 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Trbv20A0A0B4J1H5 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC22.21■■□□□ 1.15
Trbv20A0A0B4J1H5 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms