Protein–RNA interactions for Protein: Q9Z262

Cldn6, Claudin-6, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn6Q9Z262 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
Cldn6Q9Z262 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cldn6Q9Z262 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cldn6Q9Z262 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Cldn6Q9Z262 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cldn6Q9Z262 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cldn6Q9Z262 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cldn6Q9Z262 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cldn6Q9Z262 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Cldn6Q9Z262 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cldn6Q9Z262 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.97■□□□□ 0.47
Cldn6Q9Z262 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cldn6Q9Z262 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Cldn6Q9Z262 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cldn6Q9Z262 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cldn6Q9Z262 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cldn6Q9Z262 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cldn6Q9Z262 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cldn6Q9Z262 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Cldn6Q9Z262 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cldn6Q9Z262 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Cldn6Q9Z262 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cldn6Q9Z262 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cldn6Q9Z262 Gm43017-201ENSMUST00000198296 752 ntBASIC17.96■□□□□ 0.47
Cldn6Q9Z262 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Cldn6Q9Z262 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cldn6Q9Z262 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.96■□□□□ 0.46
Cldn6Q9Z262 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.46
Cldn6Q9Z262 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
Cldn6Q9Z262 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cldn6Q9Z262 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cldn6Q9Z262 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cldn6Q9Z262 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
Cldn6Q9Z262 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Cldn6Q9Z262 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Cldn6Q9Z262 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.95■□□□□ 0.46
Cldn6Q9Z262 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Cldn6Q9Z262 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cldn6Q9Z262 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cldn6Q9Z262 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Cldn6Q9Z262 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cldn6Q9Z262 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cldn6Q9Z262 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Cldn6Q9Z262 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cldn6Q9Z262 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cldn6Q9Z262 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cldn6Q9Z262 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC17.94■□□□□ 0.46
Cldn6Q9Z262 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cldn6Q9Z262 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.94■□□□□ 0.46
Cldn6Q9Z262 Gm26833-201ENSMUST00000180899 440 ntBASIC17.94■□□□□ 0.46
Cldn6Q9Z262 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cldn6Q9Z262 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cldn6Q9Z262 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Cldn6Q9Z262 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.94■□□□□ 0.46
Cldn6Q9Z262 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cldn6Q9Z262 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.93■□□□□ 0.46
Cldn6Q9Z262 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cldn6Q9Z262 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cldn6Q9Z262 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.93■□□□□ 0.46
Cldn6Q9Z262 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC17.93■□□□□ 0.46
Cldn6Q9Z262 Gm40848-201ENSMUST00000221998 324 ntBASIC17.93■□□□□ 0.46
Cldn6Q9Z262 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cldn6Q9Z262 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cldn6Q9Z262 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cldn6Q9Z262 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cldn6Q9Z262 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cldn6Q9Z262 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cldn6Q9Z262 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cldn6Q9Z262 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cldn6Q9Z262 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Cldn6Q9Z262 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Cldn6Q9Z262 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cldn6Q9Z262 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.92■□□□□ 0.46
Cldn6Q9Z262 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Cldn6Q9Z262 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Cldn6Q9Z262 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cldn6Q9Z262 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Cldn6Q9Z262 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Cldn6Q9Z262 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Cldn6Q9Z262 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cldn6Q9Z262 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cldn6Q9Z262 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cldn6Q9Z262 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cldn6Q9Z262 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Cldn6Q9Z262 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cldn6Q9Z262 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC17.91■□□□□ 0.46
Cldn6Q9Z262 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Cldn6Q9Z262 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Cldn6Q9Z262 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cldn6Q9Z262 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cldn6Q9Z262 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cldn6Q9Z262 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cldn6Q9Z262 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cldn6Q9Z262 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cldn6Q9Z262 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cldn6Q9Z262 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cldn6Q9Z262 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.9■□□□□ 0.46
Cldn6Q9Z262 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cldn6Q9Z262 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
Cldn6Q9Z262 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms