Protein–RNA interactions for Protein: Q9Z1G3

Atp6v1c1, V-type proton ATPase subunit C 1, mousemouse

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6v1c1Q9Z1G3 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Atp6v1c1Q9Z1G3 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Atp6v1c1Q9Z1G3 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.76■□□□□ 0.59
Atp6v1c1Q9Z1G3 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Atp6v1c1Q9Z1G3 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Atp6v1c1Q9Z1G3 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Atp6v1c1Q9Z1G3 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Atp6v1c1Q9Z1G3 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.75■□□□□ 0.59
Atp6v1c1Q9Z1G3 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Atp6v1c1Q9Z1G3 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Atp6v1c1Q9Z1G3 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Atp6v1c1Q9Z1G3 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Atp6v1c1Q9Z1G3 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Atp6v1c1Q9Z1G3 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Atp6v1c1Q9Z1G3 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Atp6v1c1Q9Z1G3 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Atp6v1c1Q9Z1G3 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Atp6v1c1Q9Z1G3 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Atp6v1c1Q9Z1G3 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.75■□□□□ 0.59
Atp6v1c1Q9Z1G3 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Atp6v1c1Q9Z1G3 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Atp6v1c1Q9Z1G3 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Atp6v1c1Q9Z1G3 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Atp6v1c1Q9Z1G3 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Atp6v1c1Q9Z1G3 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Atp6v1c1Q9Z1G3 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Atp6v1c1Q9Z1G3 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Atp6v1c1Q9Z1G3 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Atp6v1c1Q9Z1G3 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Atp6v1c1Q9Z1G3 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
Atp6v1c1Q9Z1G3 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Atp6v1c1Q9Z1G3 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Atp6v1c1Q9Z1G3 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Atp6v1c1Q9Z1G3 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Atp6v1c1Q9Z1G3 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Atp6v1c1Q9Z1G3 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Atp6v1c1Q9Z1G3 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Atp6v1c1Q9Z1G3 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Atp6v1c1Q9Z1G3 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Atp6v1c1Q9Z1G3 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Atp6v1c1Q9Z1G3 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Atp6v1c1Q9Z1G3 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Atp6v1c1Q9Z1G3 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Atp6v1c1Q9Z1G3 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Atp6v1c1Q9Z1G3 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Atp6v1c1Q9Z1G3 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Atp6v1c1Q9Z1G3 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Atp6v1c1Q9Z1G3 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
Atp6v1c1Q9Z1G3 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Atp6v1c1Q9Z1G3 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.73■□□□□ 0.59
Atp6v1c1Q9Z1G3 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.73■□□□□ 0.59
Atp6v1c1Q9Z1G3 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Atp6v1c1Q9Z1G3 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Atp6v1c1Q9Z1G3 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.72■□□□□ 0.59
Atp6v1c1Q9Z1G3 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.72■□□□□ 0.59
Atp6v1c1Q9Z1G3 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Atp6v1c1Q9Z1G3 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Atp6v1c1Q9Z1G3 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.72■□□□□ 0.59
Atp6v1c1Q9Z1G3 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Atp6v1c1Q9Z1G3 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Atp6v1c1Q9Z1G3 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Atp6v1c1Q9Z1G3 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Atp6v1c1Q9Z1G3 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Atp6v1c1Q9Z1G3 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Atp6v1c1Q9Z1G3 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.72■□□□□ 0.59
Atp6v1c1Q9Z1G3 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Atp6v1c1Q9Z1G3 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Atp6v1c1Q9Z1G3 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Atp6v1c1Q9Z1G3 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Atp6v1c1Q9Z1G3 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.71■□□□□ 0.59
Atp6v1c1Q9Z1G3 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Atp6v1c1Q9Z1G3 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Atp6v1c1Q9Z1G3 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.71■□□□□ 0.59
Atp6v1c1Q9Z1G3 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.71■□□□□ 0.59
Atp6v1c1Q9Z1G3 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.71■□□□□ 0.59
Atp6v1c1Q9Z1G3 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.71■□□□□ 0.59
Atp6v1c1Q9Z1G3 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
Atp6v1c1Q9Z1G3 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Atp6v1c1Q9Z1G3 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Atp6v1c1Q9Z1G3 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Atp6v1c1Q9Z1G3 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Atp6v1c1Q9Z1G3 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Atp6v1c1Q9Z1G3 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Atp6v1c1Q9Z1G3 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Atp6v1c1Q9Z1G3 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Atp6v1c1Q9Z1G3 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Atp6v1c1Q9Z1G3 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Atp6v1c1Q9Z1G3 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Atp6v1c1Q9Z1G3 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.7■□□□□ 0.58
Atp6v1c1Q9Z1G3 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Atp6v1c1Q9Z1G3 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.7■□□□□ 0.58
Atp6v1c1Q9Z1G3 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Atp6v1c1Q9Z1G3 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Atp6v1c1Q9Z1G3 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Atp6v1c1Q9Z1G3 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Atp6v1c1Q9Z1G3 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Atp6v1c1Q9Z1G3 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.69■□□□□ 0.58
Atp6v1c1Q9Z1G3 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.69■□□□□ 0.58
Atp6v1c1Q9Z1G3 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Atp6v1c1Q9Z1G3 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms