Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Smarcb1Q9Z0H3 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Smarcb1Q9Z0H3 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smarcb1Q9Z0H3 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Smarcb1Q9Z0H3 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Smarcb1Q9Z0H3 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smarcb1Q9Z0H3 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smarcb1Q9Z0H3 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smarcb1Q9Z0H3 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smarcb1Q9Z0H3 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Smarcb1Q9Z0H3 Gm6420-201ENSMUST00000193885 723 ntBASIC19.96■□□□□ 0.79
Smarcb1Q9Z0H3 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.96■□□□□ 0.79
Smarcb1Q9Z0H3 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smarcb1Q9Z0H3 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smarcb1Q9Z0H3 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smarcb1Q9Z0H3 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smarcb1Q9Z0H3 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Smarcb1Q9Z0H3 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smarcb1Q9Z0H3 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Smarcb1Q9Z0H3 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smarcb1Q9Z0H3 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Smarcb1Q9Z0H3 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smarcb1Q9Z0H3 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smarcb1Q9Z0H3 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Smarcb1Q9Z0H3 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smarcb1Q9Z0H3 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Smarcb1Q9Z0H3 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Smarcb1Q9Z0H3 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smarcb1Q9Z0H3 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smarcb1Q9Z0H3 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Smarcb1Q9Z0H3 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Smarcb1Q9Z0H3 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smarcb1Q9Z0H3 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.94■□□□□ 0.78
Smarcb1Q9Z0H3 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.94■□□□□ 0.78
Smarcb1Q9Z0H3 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Smarcb1Q9Z0H3 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smarcb1Q9Z0H3 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.94■□□□□ 0.78
Smarcb1Q9Z0H3 Gm6365-201ENSMUST00000054711 744 ntBASIC19.94■□□□□ 0.78
Smarcb1Q9Z0H3 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Smarcb1Q9Z0H3 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
Smarcb1Q9Z0H3 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smarcb1Q9Z0H3 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smarcb1Q9Z0H3 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smarcb1Q9Z0H3 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smarcb1Q9Z0H3 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.93■□□□□ 0.78
Smarcb1Q9Z0H3 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smarcb1Q9Z0H3 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smarcb1Q9Z0H3 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smarcb1Q9Z0H3 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smarcb1Q9Z0H3 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Smarcb1Q9Z0H3 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smarcb1Q9Z0H3 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smarcb1Q9Z0H3 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smarcb1Q9Z0H3 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smarcb1Q9Z0H3 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smarcb1Q9Z0H3 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smarcb1Q9Z0H3 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smarcb1Q9Z0H3 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smarcb1Q9Z0H3 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smarcb1Q9Z0H3 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Smarcb1Q9Z0H3 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smarcb1Q9Z0H3 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smarcb1Q9Z0H3 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smarcb1Q9Z0H3 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.92■□□□□ 0.78
Smarcb1Q9Z0H3 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Smarcb1Q9Z0H3 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Smarcb1Q9Z0H3 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Smarcb1Q9Z0H3 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
Smarcb1Q9Z0H3 Nespas-201ENSMUST00000143738 1083 ntBASIC19.91■□□□□ 0.78
Smarcb1Q9Z0H3 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Smarcb1Q9Z0H3 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smarcb1Q9Z0H3 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smarcb1Q9Z0H3 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Smarcb1Q9Z0H3 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smarcb1Q9Z0H3 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smarcb1Q9Z0H3 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smarcb1Q9Z0H3 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smarcb1Q9Z0H3 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Smarcb1Q9Z0H3 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Smarcb1Q9Z0H3 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.9■□□□□ 0.78
Smarcb1Q9Z0H3 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smarcb1Q9Z0H3 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Smarcb1Q9Z0H3 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smarcb1Q9Z0H3 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smarcb1Q9Z0H3 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.9■□□□□ 0.78
Smarcb1Q9Z0H3 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Smarcb1Q9Z0H3 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.78
Smarcb1Q9Z0H3 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smarcb1Q9Z0H3 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smarcb1Q9Z0H3 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.89■□□□□ 0.77
Smarcb1Q9Z0H3 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Smarcb1Q9Z0H3 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Smarcb1Q9Z0H3 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smarcb1Q9Z0H3 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smarcb1Q9Z0H3 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Smarcb1Q9Z0H3 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smarcb1Q9Z0H3 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smarcb1Q9Z0H3 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Smarcb1Q9Z0H3 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Smarcb1Q9Z0H3 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms