Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cldn3Q9Z0G9 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cldn3Q9Z0G9 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cldn3Q9Z0G9 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.41■□□□□ 0.7
Cldn3Q9Z0G9 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.41■□□□□ 0.7
Cldn3Q9Z0G9 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Cldn3Q9Z0G9 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cldn3Q9Z0G9 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cldn3Q9Z0G9 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cldn3Q9Z0G9 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cldn3Q9Z0G9 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.4■□□□□ 0.7
Cldn3Q9Z0G9 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cldn3Q9Z0G9 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Cldn3Q9Z0G9 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cldn3Q9Z0G9 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cldn3Q9Z0G9 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cldn3Q9Z0G9 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cldn3Q9Z0G9 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Cldn3Q9Z0G9 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Cldn3Q9Z0G9 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cldn3Q9Z0G9 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Cldn3Q9Z0G9 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.39■□□□□ 0.69
Cldn3Q9Z0G9 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.39■□□□□ 0.69
Cldn3Q9Z0G9 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Cldn3Q9Z0G9 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cldn3Q9Z0G9 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cldn3Q9Z0G9 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cldn3Q9Z0G9 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Cldn3Q9Z0G9 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cldn3Q9Z0G9 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cldn3Q9Z0G9 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Cldn3Q9Z0G9 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.38■□□□□ 0.69
Cldn3Q9Z0G9 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cldn3Q9Z0G9 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Cldn3Q9Z0G9 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.37■□□□□ 0.69
Cldn3Q9Z0G9 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cldn3Q9Z0G9 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cldn3Q9Z0G9 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
Cldn3Q9Z0G9 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cldn3Q9Z0G9 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cldn3Q9Z0G9 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cldn3Q9Z0G9 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cldn3Q9Z0G9 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.36■□□□□ 0.69
Cldn3Q9Z0G9 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
Cldn3Q9Z0G9 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
Cldn3Q9Z0G9 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cldn3Q9Z0G9 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Cldn3Q9Z0G9 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cldn3Q9Z0G9 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cldn3Q9Z0G9 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cldn3Q9Z0G9 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cldn3Q9Z0G9 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Cldn3Q9Z0G9 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.35■□□□□ 0.69
Cldn3Q9Z0G9 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cldn3Q9Z0G9 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.35■□□□□ 0.69
Cldn3Q9Z0G9 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.35■□□□□ 0.69
Cldn3Q9Z0G9 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.35■□□□□ 0.69
Cldn3Q9Z0G9 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cldn3Q9Z0G9 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cldn3Q9Z0G9 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cldn3Q9Z0G9 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cldn3Q9Z0G9 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cldn3Q9Z0G9 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cldn3Q9Z0G9 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cldn3Q9Z0G9 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cldn3Q9Z0G9 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Cldn3Q9Z0G9 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cldn3Q9Z0G9 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cldn3Q9Z0G9 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Cldn3Q9Z0G9 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.34■□□□□ 0.69
Cldn3Q9Z0G9 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cldn3Q9Z0G9 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cldn3Q9Z0G9 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cldn3Q9Z0G9 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cldn3Q9Z0G9 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cldn3Q9Z0G9 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cldn3Q9Z0G9 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Cldn3Q9Z0G9 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cldn3Q9Z0G9 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Cldn3Q9Z0G9 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.33■□□□□ 0.68
Cldn3Q9Z0G9 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cldn3Q9Z0G9 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cldn3Q9Z0G9 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cldn3Q9Z0G9 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.33■□□□□ 0.68
Cldn3Q9Z0G9 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.33■□□□□ 0.68
Cldn3Q9Z0G9 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cldn3Q9Z0G9 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Cldn3Q9Z0G9 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.32■□□□□ 0.68
Cldn3Q9Z0G9 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cldn3Q9Z0G9 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cldn3Q9Z0G9 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cldn3Q9Z0G9 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cldn3Q9Z0G9 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cldn3Q9Z0G9 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
Cldn3Q9Z0G9 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.31■□□□□ 0.68
Cldn3Q9Z0G9 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cldn3Q9Z0G9 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cldn3Q9Z0G9 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cldn3Q9Z0G9 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cldn3Q9Z0G9 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms