Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Smad6-203ENSMUST00000179458 273 ntBASIC17.62■□□□□ 0.41
ClcnkaQ9WUB7 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
ClcnkaQ9WUB7 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ClcnkaQ9WUB7 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ClcnkaQ9WUB7 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ClcnkaQ9WUB7 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC17.62■□□□□ 0.41
ClcnkaQ9WUB7 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ClcnkaQ9WUB7 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
ClcnkaQ9WUB7 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ClcnkaQ9WUB7 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ClcnkaQ9WUB7 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ClcnkaQ9WUB7 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ClcnkaQ9WUB7 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ClcnkaQ9WUB7 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.61■□□□□ 0.41
ClcnkaQ9WUB7 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ClcnkaQ9WUB7 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ClcnkaQ9WUB7 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ClcnkaQ9WUB7 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.61■□□□□ 0.41
ClcnkaQ9WUB7 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17.61■□□□□ 0.41
ClcnkaQ9WUB7 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
ClcnkaQ9WUB7 Gm43017-201ENSMUST00000198296 752 ntBASIC17.61■□□□□ 0.41
ClcnkaQ9WUB7 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
ClcnkaQ9WUB7 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
ClcnkaQ9WUB7 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ClcnkaQ9WUB7 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ClcnkaQ9WUB7 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ClcnkaQ9WUB7 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ClcnkaQ9WUB7 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ClcnkaQ9WUB7 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ClcnkaQ9WUB7 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ClcnkaQ9WUB7 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
ClcnkaQ9WUB7 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.6■□□□□ 0.41
ClcnkaQ9WUB7 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ClcnkaQ9WUB7 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.6■□□□□ 0.41
ClcnkaQ9WUB7 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ClcnkaQ9WUB7 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ClcnkaQ9WUB7 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.6■□□□□ 0.41
ClcnkaQ9WUB7 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
ClcnkaQ9WUB7 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ClcnkaQ9WUB7 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ClcnkaQ9WUB7 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ClcnkaQ9WUB7 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ClcnkaQ9WUB7 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ClcnkaQ9WUB7 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.59■□□□□ 0.41
ClcnkaQ9WUB7 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ClcnkaQ9WUB7 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.59■□□□□ 0.41
ClcnkaQ9WUB7 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ClcnkaQ9WUB7 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ClcnkaQ9WUB7 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ClcnkaQ9WUB7 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ClcnkaQ9WUB7 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
ClcnkaQ9WUB7 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ClcnkaQ9WUB7 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ClcnkaQ9WUB7 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ClcnkaQ9WUB7 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
ClcnkaQ9WUB7 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ClcnkaQ9WUB7 Gm11421-201ENSMUST00000122124 294 ntBASIC17.58■□□□□ 0.4
ClcnkaQ9WUB7 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ClcnkaQ9WUB7 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.58■□□□□ 0.4
ClcnkaQ9WUB7 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ClcnkaQ9WUB7 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ClcnkaQ9WUB7 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ClcnkaQ9WUB7 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ClcnkaQ9WUB7 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
ClcnkaQ9WUB7 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ClcnkaQ9WUB7 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC17.57■□□□□ 0.4
ClcnkaQ9WUB7 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
ClcnkaQ9WUB7 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ClcnkaQ9WUB7 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ClcnkaQ9WUB7 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ClcnkaQ9WUB7 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
ClcnkaQ9WUB7 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ClcnkaQ9WUB7 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ClcnkaQ9WUB7 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ClcnkaQ9WUB7 Golph3-205ENSMUST00000228671 2842 ntBASIC17.56■□□□□ 0.4
ClcnkaQ9WUB7 Gm26833-201ENSMUST00000180899 440 ntBASIC17.56■□□□□ 0.4
ClcnkaQ9WUB7 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.56■□□□□ 0.4
ClcnkaQ9WUB7 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.56■□□□□ 0.4
ClcnkaQ9WUB7 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ClcnkaQ9WUB7 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
ClcnkaQ9WUB7 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
ClcnkaQ9WUB7 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
ClcnkaQ9WUB7 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
ClcnkaQ9WUB7 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.55■□□□□ 0.4
ClcnkaQ9WUB7 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
ClcnkaQ9WUB7 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ClcnkaQ9WUB7 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
ClcnkaQ9WUB7 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ClcnkaQ9WUB7 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
ClcnkaQ9WUB7 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
ClcnkaQ9WUB7 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
ClcnkaQ9WUB7 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
ClcnkaQ9WUB7 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ClcnkaQ9WUB7 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ClcnkaQ9WUB7 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ClcnkaQ9WUB7 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ClcnkaQ9WUB7 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ClcnkaQ9WUB7 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ClcnkaQ9WUB7 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
ClcnkaQ9WUB7 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms