Protein–RNA interactions for Protein: Q9QZS2

Rnf4, E3 ubiquitin-protein ligase RNF4, mousemouse

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4Q9QZS2 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Rnf4Q9QZS2 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rnf4Q9QZS2 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.38■□□□□ 0.69
Rnf4Q9QZS2 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
Rnf4Q9QZS2 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Rnf4Q9QZS2 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Rnf4Q9QZS2 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.38■□□□□ 0.69
Rnf4Q9QZS2 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Rnf4Q9QZS2 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rnf4Q9QZS2 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rnf4Q9QZS2 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rnf4Q9QZS2 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Rnf4Q9QZS2 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rnf4Q9QZS2 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Rnf4Q9QZS2 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.37■□□□□ 0.69
Rnf4Q9QZS2 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rnf4Q9QZS2 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rnf4Q9QZS2 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rnf4Q9QZS2 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rnf4Q9QZS2 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rnf4Q9QZS2 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rnf4Q9QZS2 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Rnf4Q9QZS2 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Rnf4Q9QZS2 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Rnf4Q9QZS2 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Rnf4Q9QZS2 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rnf4Q9QZS2 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Rnf4Q9QZS2 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rnf4Q9QZS2 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rnf4Q9QZS2 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.36■□□□□ 0.69
Rnf4Q9QZS2 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC19.36■□□□□ 0.69
Rnf4Q9QZS2 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rnf4Q9QZS2 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.36■□□□□ 0.69
Rnf4Q9QZS2 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rnf4Q9QZS2 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rnf4Q9QZS2 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Rnf4Q9QZS2 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Rnf4Q9QZS2 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Rnf4Q9QZS2 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rnf4Q9QZS2 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.35■□□□□ 0.69
Rnf4Q9QZS2 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rnf4Q9QZS2 AA386476-201ENSMUST00000098781 1665 ntBASIC19.35■□□□□ 0.69
Rnf4Q9QZS2 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rnf4Q9QZS2 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rnf4Q9QZS2 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rnf4Q9QZS2 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rnf4Q9QZS2 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf4Q9QZS2 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.34■□□□□ 0.69
Rnf4Q9QZS2 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Rnf4Q9QZS2 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf4Q9QZS2 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf4Q9QZS2 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf4Q9QZS2 Gm10420-201ENSMUST00000121713 882 ntBASIC19.34■□□□□ 0.69
Rnf4Q9QZS2 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.34■□□□□ 0.69
Rnf4Q9QZS2 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Rnf4Q9QZS2 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf4Q9QZS2 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf4Q9QZS2 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Rnf4Q9QZS2 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf4Q9QZS2 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.34■□□□□ 0.69
Rnf4Q9QZS2 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Rnf4Q9QZS2 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rnf4Q9QZS2 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rnf4Q9QZS2 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rnf4Q9QZS2 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rnf4Q9QZS2 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rnf4Q9QZS2 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rnf4Q9QZS2 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rnf4Q9QZS2 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rnf4Q9QZS2 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Rnf4Q9QZS2 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Rnf4Q9QZS2 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Rnf4Q9QZS2 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.33■□□□□ 0.68
Rnf4Q9QZS2 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Rnf4Q9QZS2 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Rnf4Q9QZS2 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rnf4Q9QZS2 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rnf4Q9QZS2 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rnf4Q9QZS2 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rnf4Q9QZS2 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rnf4Q9QZS2 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Rnf4Q9QZS2 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rnf4Q9QZS2 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rnf4Q9QZS2 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rnf4Q9QZS2 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rnf4Q9QZS2 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rnf4Q9QZS2 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.32■□□□□ 0.68
Rnf4Q9QZS2 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf4Q9QZS2 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf4Q9QZS2 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Rnf4Q9QZS2 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.31■□□□□ 0.68
Rnf4Q9QZS2 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf4Q9QZS2 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.31■□□□□ 0.68
Rnf4Q9QZS2 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf4Q9QZS2 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf4Q9QZS2 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.31■□□□□ 0.68
Rnf4Q9QZS2 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf4Q9QZS2 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rnf4Q9QZS2 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf4Q9QZS2 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms