Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sec61a2Q9JLR1 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sec61a2Q9JLR1 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
Sec61a2Q9JLR1 AA386476-201ENSMUST00000098781 1665 ntBASIC17.24■□□□□ 0.35
Sec61a2Q9JLR1 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sec61a2Q9JLR1 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC17.24■□□□□ 0.35
Sec61a2Q9JLR1 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sec61a2Q9JLR1 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sec61a2Q9JLR1 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sec61a2Q9JLR1 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sec61a2Q9JLR1 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sec61a2Q9JLR1 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sec61a2Q9JLR1 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
Sec61a2Q9JLR1 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sec61a2Q9JLR1 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Sec61a2Q9JLR1 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sec61a2Q9JLR1 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sec61a2Q9JLR1 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC17.23■□□□□ 0.35
Sec61a2Q9JLR1 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Sec61a2Q9JLR1 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sec61a2Q9JLR1 Gm6139-201ENSMUST00000079261 882 ntBASIC17.23■□□□□ 0.35
Sec61a2Q9JLR1 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.23■□□□□ 0.35
Sec61a2Q9JLR1 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sec61a2Q9JLR1 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sec61a2Q9JLR1 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Sec61a2Q9JLR1 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Sec61a2Q9JLR1 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sec61a2Q9JLR1 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sec61a2Q9JLR1 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Sec61a2Q9JLR1 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sec61a2Q9JLR1 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sec61a2Q9JLR1 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Sec61a2Q9JLR1 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sec61a2Q9JLR1 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sec61a2Q9JLR1 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Sec61a2Q9JLR1 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.22■□□□□ 0.35
Sec61a2Q9JLR1 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC17.22■□□□□ 0.35
Sec61a2Q9JLR1 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Sec61a2Q9JLR1 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sec61a2Q9JLR1 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sec61a2Q9JLR1 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Sec61a2Q9JLR1 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.22■□□□□ 0.35
Sec61a2Q9JLR1 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sec61a2Q9JLR1 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Sec61a2Q9JLR1 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sec61a2Q9JLR1 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Sec61a2Q9JLR1 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Sec61a2Q9JLR1 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
Sec61a2Q9JLR1 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sec61a2Q9JLR1 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sec61a2Q9JLR1 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sec61a2Q9JLR1 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Sec61a2Q9JLR1 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Sec61a2Q9JLR1 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Sec61a2Q9JLR1 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.21■□□□□ 0.35
Sec61a2Q9JLR1 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.21■□□□□ 0.35
Sec61a2Q9JLR1 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sec61a2Q9JLR1 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sec61a2Q9JLR1 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sec61a2Q9JLR1 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sec61a2Q9JLR1 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
Sec61a2Q9JLR1 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
Sec61a2Q9JLR1 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sec61a2Q9JLR1 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Sec61a2Q9JLR1 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sec61a2Q9JLR1 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sec61a2Q9JLR1 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sec61a2Q9JLR1 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sec61a2Q9JLR1 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.2■□□□□ 0.34
Sec61a2Q9JLR1 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sec61a2Q9JLR1 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sec61a2Q9JLR1 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sec61a2Q9JLR1 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Sec61a2Q9JLR1 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.18■□□□□ 0.34
Sec61a2Q9JLR1 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sec61a2Q9JLR1 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.18■□□□□ 0.34
Sec61a2Q9JLR1 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sec61a2Q9JLR1 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Sec61a2Q9JLR1 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.18■□□□□ 0.34
Sec61a2Q9JLR1 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Sec61a2Q9JLR1 Gm7160-202ENSMUST00000188519 1027 ntBASIC17.18■□□□□ 0.34
Sec61a2Q9JLR1 Gm8493-201ENSMUST00000196881 489 ntBASIC17.18■□□□□ 0.34
Sec61a2Q9JLR1 Gm43017-201ENSMUST00000198296 752 ntBASIC17.18■□□□□ 0.34
Sec61a2Q9JLR1 Serp2-204ENSMUST00000228055 705 ntBASIC17.18■□□□□ 0.34
Sec61a2Q9JLR1 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sec61a2Q9JLR1 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.18■□□□□ 0.34
Sec61a2Q9JLR1 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Sec61a2Q9JLR1 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sec61a2Q9JLR1 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Sec61a2Q9JLR1 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
Sec61a2Q9JLR1 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Sec61a2Q9JLR1 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sec61a2Q9JLR1 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sec61a2Q9JLR1 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sec61a2Q9JLR1 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sec61a2Q9JLR1 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sec61a2Q9JLR1 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
Sec61a2Q9JLR1 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sec61a2Q9JLR1 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.17■□□□□ 0.34
Sec61a2Q9JLR1 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms