Protein–RNA interactions for Protein: Q9JL61

Rfx5, DNA-binding protein Rfx5, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx5Q9JL61 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Rfx5Q9JL61 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Rfx5Q9JL61 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Rfx5Q9JL61 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rfx5Q9JL61 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rfx5Q9JL61 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Rfx5Q9JL61 Gm13234-201ENSMUST00000120010 747 ntBASIC20.39■□□□□ 0.85
Rfx5Q9JL61 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Rfx5Q9JL61 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.39■□□□□ 0.85
Rfx5Q9JL61 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rfx5Q9JL61 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Rfx5Q9JL61 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Rfx5Q9JL61 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.85
Rfx5Q9JL61 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rfx5Q9JL61 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.39■□□□□ 0.85
Rfx5Q9JL61 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rfx5Q9JL61 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rfx5Q9JL61 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rfx5Q9JL61 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rfx5Q9JL61 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.38■□□□□ 0.85
Rfx5Q9JL61 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rfx5Q9JL61 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Rfx5Q9JL61 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rfx5Q9JL61 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Rfx5Q9JL61 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.37■□□□□ 0.85
Rfx5Q9JL61 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.37■□□□□ 0.85
Rfx5Q9JL61 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Rfx5Q9JL61 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Rfx5Q9JL61 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rfx5Q9JL61 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rfx5Q9JL61 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rfx5Q9JL61 Gm13146-201ENSMUST00000118508 780 ntBASIC20.36■□□□□ 0.85
Rfx5Q9JL61 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.36■□□□□ 0.85
Rfx5Q9JL61 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rfx5Q9JL61 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.36■□□□□ 0.85
Rfx5Q9JL61 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.36■□□□□ 0.85
Rfx5Q9JL61 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.36■□□□□ 0.85
Rfx5Q9JL61 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Rfx5Q9JL61 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rfx5Q9JL61 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rfx5Q9JL61 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Rfx5Q9JL61 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rfx5Q9JL61 Gm10849-201ENSMUST00000100397 618 ntBASIC20.35■□□□□ 0.85
Rfx5Q9JL61 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Rfx5Q9JL61 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rfx5Q9JL61 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Rfx5Q9JL61 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.35■□□□□ 0.85
Rfx5Q9JL61 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Rfx5Q9JL61 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.35■□□□□ 0.85
Rfx5Q9JL61 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rfx5Q9JL61 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rfx5Q9JL61 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rfx5Q9JL61 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Rfx5Q9JL61 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Rfx5Q9JL61 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rfx5Q9JL61 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.34■□□□□ 0.85
Rfx5Q9JL61 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Rfx5Q9JL61 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Rfx5Q9JL61 Gm42778-201ENSMUST00000199644 553 ntBASIC20.34■□□□□ 0.85
Rfx5Q9JL61 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rfx5Q9JL61 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Rfx5Q9JL61 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rfx5Q9JL61 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.34■□□□□ 0.85
Rfx5Q9JL61 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rfx5Q9JL61 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rfx5Q9JL61 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rfx5Q9JL61 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Rfx5Q9JL61 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rfx5Q9JL61 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Rfx5Q9JL61 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Rfx5Q9JL61 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Rfx5Q9JL61 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rfx5Q9JL61 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rfx5Q9JL61 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.32■□□□□ 0.84
Rfx5Q9JL61 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rfx5Q9JL61 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.32■□□□□ 0.84
Rfx5Q9JL61 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rfx5Q9JL61 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rfx5Q9JL61 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Rfx5Q9JL61 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
Rfx5Q9JL61 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rfx5Q9JL61 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Rfx5Q9JL61 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Rfx5Q9JL61 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rfx5Q9JL61 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rfx5Q9JL61 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Rfx5Q9JL61 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Rfx5Q9JL61 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rfx5Q9JL61 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rfx5Q9JL61 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rfx5Q9JL61 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.31■□□□□ 0.84
Rfx5Q9JL61 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rfx5Q9JL61 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rfx5Q9JL61 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rfx5Q9JL61 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rfx5Q9JL61 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rfx5Q9JL61 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
Rfx5Q9JL61 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.3■□□□□ 0.84
Rfx5Q9JL61 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Rfx5Q9JL61 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms