Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC18.42■□□□□ 0.54
Ube4bQ9ES00 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Ube4bQ9ES00 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ube4bQ9ES00 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ube4bQ9ES00 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ube4bQ9ES00 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC18.41■□□□□ 0.54
Ube4bQ9ES00 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ube4bQ9ES00 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC18.41■□□□□ 0.54
Ube4bQ9ES00 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ube4bQ9ES00 Gm45444-201ENSMUST00000211394 898 ntBASIC18.41■□□□□ 0.54
Ube4bQ9ES00 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Ube4bQ9ES00 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ube4bQ9ES00 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ube4bQ9ES00 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ube4bQ9ES00 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ube4bQ9ES00 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.41■□□□□ 0.54
Ube4bQ9ES00 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
Ube4bQ9ES00 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ube4bQ9ES00 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ube4bQ9ES00 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.4■□□□□ 0.54
Ube4bQ9ES00 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ube4bQ9ES00 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ube4bQ9ES00 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ube4bQ9ES00 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ube4bQ9ES00 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.4■□□□□ 0.54
Ube4bQ9ES00 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ube4bQ9ES00 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ube4bQ9ES00 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ube4bQ9ES00 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ube4bQ9ES00 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Ube4bQ9ES00 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ube4bQ9ES00 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ube4bQ9ES00 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ube4bQ9ES00 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ube4bQ9ES00 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.39■□□□□ 0.54
Ube4bQ9ES00 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ube4bQ9ES00 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Ube4bQ9ES00 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
Ube4bQ9ES00 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC18.39■□□□□ 0.53
Ube4bQ9ES00 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ube4bQ9ES00 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ube4bQ9ES00 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ube4bQ9ES00 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
Ube4bQ9ES00 BC021767-201ENSMUST00000126387 1716 ntBASIC18.39■□□□□ 0.53
Ube4bQ9ES00 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.53
Ube4bQ9ES00 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ube4bQ9ES00 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ube4bQ9ES00 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ube4bQ9ES00 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ube4bQ9ES00 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ube4bQ9ES00 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ube4bQ9ES00 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ube4bQ9ES00 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ube4bQ9ES00 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ube4bQ9ES00 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ube4bQ9ES00 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ube4bQ9ES00 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ube4bQ9ES00 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ube4bQ9ES00 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Ube4bQ9ES00 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ube4bQ9ES00 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ube4bQ9ES00 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ube4bQ9ES00 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ube4bQ9ES00 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.38■□□□□ 0.53
Ube4bQ9ES00 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ube4bQ9ES00 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ube4bQ9ES00 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ube4bQ9ES00 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ube4bQ9ES00 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC18.37■□□□□ 0.53
Ube4bQ9ES00 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.37■□□□□ 0.53
Ube4bQ9ES00 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.37■□□□□ 0.53
Ube4bQ9ES00 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ube4bQ9ES00 Gm5921-201ENSMUST00000075898 882 ntBASIC18.37■□□□□ 0.53
Ube4bQ9ES00 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ube4bQ9ES00 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ube4bQ9ES00 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.37■□□□□ 0.53
Ube4bQ9ES00 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ube4bQ9ES00 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ube4bQ9ES00 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ube4bQ9ES00 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Ube4bQ9ES00 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ube4bQ9ES00 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
Ube4bQ9ES00 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ube4bQ9ES00 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ube4bQ9ES00 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ube4bQ9ES00 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Ube4bQ9ES00 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Ube4bQ9ES00 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ube4bQ9ES00 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC18.36■□□□□ 0.53
Ube4bQ9ES00 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ube4bQ9ES00 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ube4bQ9ES00 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.36■□□□□ 0.53
Ube4bQ9ES00 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ube4bQ9ES00 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ube4bQ9ES00 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ube4bQ9ES00 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
Ube4bQ9ES00 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ube4bQ9ES00 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ube4bQ9ES00 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ube4bQ9ES00 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms