Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hmgn3Q9DCB1 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Hmgn3Q9DCB1 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Hmgn3Q9DCB1 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hmgn3Q9DCB1 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.04■□□□□ 0.48
Hmgn3Q9DCB1 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hmgn3Q9DCB1 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Hmgn3Q9DCB1 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC18.04■□□□□ 0.48
Hmgn3Q9DCB1 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hmgn3Q9DCB1 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Hmgn3Q9DCB1 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hmgn3Q9DCB1 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.03■□□□□ 0.48
Hmgn3Q9DCB1 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hmgn3Q9DCB1 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Hmgn3Q9DCB1 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.03■□□□□ 0.48
Hmgn3Q9DCB1 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hmgn3Q9DCB1 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Hmgn3Q9DCB1 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hmgn3Q9DCB1 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hmgn3Q9DCB1 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Hmgn3Q9DCB1 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Hmgn3Q9DCB1 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Hmgn3Q9DCB1 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.02■□□□□ 0.48
Hmgn3Q9DCB1 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Hmgn3Q9DCB1 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Hmgn3Q9DCB1 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Hmgn3Q9DCB1 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Hmgn3Q9DCB1 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Hmgn3Q9DCB1 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.02■□□□□ 0.48
Hmgn3Q9DCB1 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Hmgn3Q9DCB1 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Hmgn3Q9DCB1 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Hmgn3Q9DCB1 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Hmgn3Q9DCB1 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Hmgn3Q9DCB1 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.01■□□□□ 0.47
Hmgn3Q9DCB1 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Hmgn3Q9DCB1 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hmgn3Q9DCB1 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.01■□□□□ 0.47
Hmgn3Q9DCB1 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hmgn3Q9DCB1 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Hmgn3Q9DCB1 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.01■□□□□ 0.47
Hmgn3Q9DCB1 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hmgn3Q9DCB1 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC18.01■□□□□ 0.47
Hmgn3Q9DCB1 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Hmgn3Q9DCB1 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Hmgn3Q9DCB1 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hmgn3Q9DCB1 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Hmgn3Q9DCB1 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.01■□□□□ 0.47
Hmgn3Q9DCB1 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hmgn3Q9DCB1 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Hmgn3Q9DCB1 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hmgn3Q9DCB1 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18■□□□□ 0.47
Hmgn3Q9DCB1 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18■□□□□ 0.47
Hmgn3Q9DCB1 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hmgn3Q9DCB1 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18■□□□□ 0.47
Hmgn3Q9DCB1 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hmgn3Q9DCB1 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18■□□□□ 0.47
Hmgn3Q9DCB1 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hmgn3Q9DCB1 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18■□□□□ 0.47
Hmgn3Q9DCB1 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hmgn3Q9DCB1 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hmgn3Q9DCB1 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18■□□□□ 0.47
Hmgn3Q9DCB1 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hmgn3Q9DCB1 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hmgn3Q9DCB1 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Hmgn3Q9DCB1 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hmgn3Q9DCB1 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.99■□□□□ 0.47
Hmgn3Q9DCB1 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hmgn3Q9DCB1 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hmgn3Q9DCB1 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Hmgn3Q9DCB1 Gm7143-201ENSMUST00000222811 859 ntBASIC17.99■□□□□ 0.47
Hmgn3Q9DCB1 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Hmgn3Q9DCB1 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hmgn3Q9DCB1 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Hmgn3Q9DCB1 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Hmgn3Q9DCB1 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Hmgn3Q9DCB1 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Hmgn3Q9DCB1 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.99■□□□□ 0.47
Hmgn3Q9DCB1 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hmgn3Q9DCB1 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hmgn3Q9DCB1 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hmgn3Q9DCB1 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hmgn3Q9DCB1 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hmgn3Q9DCB1 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Hmgn3Q9DCB1 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Hmgn3Q9DCB1 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC17.98■□□□□ 0.47
Hmgn3Q9DCB1 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hmgn3Q9DCB1 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Hmgn3Q9DCB1 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hmgn3Q9DCB1 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Hmgn3Q9DCB1 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hmgn3Q9DCB1 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Hmgn3Q9DCB1 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Hmgn3Q9DCB1 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Hmgn3Q9DCB1 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
Hmgn3Q9DCB1 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hmgn3Q9DCB1 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Hmgn3Q9DCB1 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.97■□□□□ 0.47
Hmgn3Q9DCB1 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC17.97■□□□□ 0.47
Hmgn3Q9DCB1 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms