Protein–RNA interactions for Protein: Q9D7V1

Sh2d4a, SH2 domain-containing protein 4A, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4aQ9D7V1 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sh2d4aQ9D7V1 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sh2d4aQ9D7V1 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sh2d4aQ9D7V1 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sh2d4aQ9D7V1 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sh2d4aQ9D7V1 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sh2d4aQ9D7V1 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sh2d4aQ9D7V1 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sh2d4aQ9D7V1 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sh2d4aQ9D7V1 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sh2d4aQ9D7V1 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
Sh2d4aQ9D7V1 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Sh2d4aQ9D7V1 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sh2d4aQ9D7V1 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sh2d4aQ9D7V1 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
Sh2d4aQ9D7V1 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Sh2d4aQ9D7V1 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.54■□□□□ 0.56
Sh2d4aQ9D7V1 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sh2d4aQ9D7V1 Gm5812-201ENSMUST00000061073 957 ntBASIC18.54■□□□□ 0.56
Sh2d4aQ9D7V1 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.54■□□□□ 0.56
Sh2d4aQ9D7V1 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sh2d4aQ9D7V1 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sh2d4aQ9D7V1 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Sh2d4aQ9D7V1 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Sh2d4aQ9D7V1 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sh2d4aQ9D7V1 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sh2d4aQ9D7V1 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sh2d4aQ9D7V1 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sh2d4aQ9D7V1 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sh2d4aQ9D7V1 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.53■□□□□ 0.56
Sh2d4aQ9D7V1 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.53■□□□□ 0.56
Sh2d4aQ9D7V1 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sh2d4aQ9D7V1 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Sh2d4aQ9D7V1 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sh2d4aQ9D7V1 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.53■□□□□ 0.56
Sh2d4aQ9D7V1 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sh2d4aQ9D7V1 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sh2d4aQ9D7V1 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sh2d4aQ9D7V1 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sh2d4aQ9D7V1 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sh2d4aQ9D7V1 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sh2d4aQ9D7V1 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sh2d4aQ9D7V1 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.52■□□□□ 0.56
Sh2d4aQ9D7V1 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sh2d4aQ9D7V1 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Sh2d4aQ9D7V1 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Sh2d4aQ9D7V1 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sh2d4aQ9D7V1 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sh2d4aQ9D7V1 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sh2d4aQ9D7V1 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.51■□□□□ 0.55
Sh2d4aQ9D7V1 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sh2d4aQ9D7V1 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sh2d4aQ9D7V1 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.51■□□□□ 0.55
Sh2d4aQ9D7V1 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sh2d4aQ9D7V1 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sh2d4aQ9D7V1 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sh2d4aQ9D7V1 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sh2d4aQ9D7V1 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Sh2d4aQ9D7V1 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sh2d4aQ9D7V1 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sh2d4aQ9D7V1 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sh2d4aQ9D7V1 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.5■□□□□ 0.55
Sh2d4aQ9D7V1 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.5■□□□□ 0.55
Sh2d4aQ9D7V1 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sh2d4aQ9D7V1 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Sh2d4aQ9D7V1 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.5■□□□□ 0.55
Sh2d4aQ9D7V1 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.5■□□□□ 0.55
Sh2d4aQ9D7V1 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sh2d4aQ9D7V1 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sh2d4aQ9D7V1 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sh2d4aQ9D7V1 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
Sh2d4aQ9D7V1 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sh2d4aQ9D7V1 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sh2d4aQ9D7V1 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Sh2d4aQ9D7V1 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sh2d4aQ9D7V1 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sh2d4aQ9D7V1 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.49■□□□□ 0.55
Sh2d4aQ9D7V1 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Sh2d4aQ9D7V1 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sh2d4aQ9D7V1 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sh2d4aQ9D7V1 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sh2d4aQ9D7V1 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sh2d4aQ9D7V1 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sh2d4aQ9D7V1 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Sh2d4aQ9D7V1 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sh2d4aQ9D7V1 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sh2d4aQ9D7V1 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sh2d4aQ9D7V1 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Sh2d4aQ9D7V1 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Sh2d4aQ9D7V1 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Sh2d4aQ9D7V1 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.48■□□□□ 0.55
Sh2d4aQ9D7V1 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Sh2d4aQ9D7V1 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.48■□□□□ 0.55
Sh2d4aQ9D7V1 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sh2d4aQ9D7V1 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sh2d4aQ9D7V1 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sh2d4aQ9D7V1 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sh2d4aQ9D7V1 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sh2d4aQ9D7V1 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sh2d4aQ9D7V1 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms