Protein–RNA interactions for Protein: Q9D7S1

Tmem54, Transmembrane protein 54, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem54Q9D7S1 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tmem54Q9D7S1 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Tmem54Q9D7S1 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC16.83■□□□□ 0.28
Tmem54Q9D7S1 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Tmem54Q9D7S1 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC16.83■□□□□ 0.28
Tmem54Q9D7S1 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tmem54Q9D7S1 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tmem54Q9D7S1 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tmem54Q9D7S1 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tmem54Q9D7S1 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tmem54Q9D7S1 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tmem54Q9D7S1 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
Tmem54Q9D7S1 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tmem54Q9D7S1 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tmem54Q9D7S1 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tmem54Q9D7S1 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Tmem54Q9D7S1 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC16.82■□□□□ 0.28
Tmem54Q9D7S1 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tmem54Q9D7S1 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tmem54Q9D7S1 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC16.82■□□□□ 0.28
Tmem54Q9D7S1 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tmem54Q9D7S1 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tmem54Q9D7S1 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Tmem54Q9D7S1 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
Tmem54Q9D7S1 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tmem54Q9D7S1 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
Tmem54Q9D7S1 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tmem54Q9D7S1 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC16.81■□□□□ 0.28
Tmem54Q9D7S1 Gm9988-201ENSMUST00000069786 435 ntBASIC16.81■□□□□ 0.28
Tmem54Q9D7S1 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC16.81■□□□□ 0.28
Tmem54Q9D7S1 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Tmem54Q9D7S1 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Tmem54Q9D7S1 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC16.81■□□□□ 0.28
Tmem54Q9D7S1 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Tmem54Q9D7S1 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tmem54Q9D7S1 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Tmem54Q9D7S1 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tmem54Q9D7S1 Golph3-202ENSMUST00000226517 2359 ntBASIC16.8■□□□□ 0.28
Tmem54Q9D7S1 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tmem54Q9D7S1 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Tmem54Q9D7S1 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Tmem54Q9D7S1 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Tmem54Q9D7S1 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Tmem54Q9D7S1 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tmem54Q9D7S1 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tmem54Q9D7S1 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tmem54Q9D7S1 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Tmem54Q9D7S1 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC16.8■□□□□ 0.28
Tmem54Q9D7S1 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Tmem54Q9D7S1 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Tmem54Q9D7S1 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Tmem54Q9D7S1 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tmem54Q9D7S1 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Tmem54Q9D7S1 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Tmem54Q9D7S1 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tmem54Q9D7S1 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC16.79■□□□□ 0.28
Tmem54Q9D7S1 Gm18284-201ENSMUST00000172604 624 ntBASIC16.79■□□□□ 0.28
Tmem54Q9D7S1 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC16.79■□□□□ 0.28
Tmem54Q9D7S1 AC099934.2-201ENSMUST00000196389 70 ntBASIC16.79■□□□□ 0.28
Tmem54Q9D7S1 AC156953.1-201ENSMUST00000196953 70 ntBASIC16.79■□□□□ 0.28
Tmem54Q9D7S1 AC157822.2-201ENSMUST00000200291 70 ntBASIC16.79■□□□□ 0.28
Tmem54Q9D7S1 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
Tmem54Q9D7S1 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Tmem54Q9D7S1 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Tmem54Q9D7S1 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Tmem54Q9D7S1 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Tmem54Q9D7S1 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tmem54Q9D7S1 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tmem54Q9D7S1 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tmem54Q9D7S1 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tmem54Q9D7S1 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tmem54Q9D7S1 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Tmem54Q9D7S1 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
Tmem54Q9D7S1 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC16.78■□□□□ 0.28
Tmem54Q9D7S1 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tmem54Q9D7S1 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tmem54Q9D7S1 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Tmem54Q9D7S1 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Tmem54Q9D7S1 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Tmem54Q9D7S1 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC16.78■□□□□ 0.28
Tmem54Q9D7S1 Gm5874-201ENSMUST00000096101 508 ntBASIC16.78■□□□□ 0.28
Tmem54Q9D7S1 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Tmem54Q9D7S1 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tmem54Q9D7S1 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Tmem54Q9D7S1 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tmem54Q9D7S1 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Tmem54Q9D7S1 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Tmem54Q9D7S1 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Tmem54Q9D7S1 Hsf1-204ENSMUST00000226872 2104 ntBASIC16.78■□□□□ 0.28
Tmem54Q9D7S1 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Tmem54Q9D7S1 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tmem54Q9D7S1 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tmem54Q9D7S1 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Tmem54Q9D7S1 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tmem54Q9D7S1 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Tmem54Q9D7S1 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tmem54Q9D7S1 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Tmem54Q9D7S1 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tmem54Q9D7S1 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Tmem54Q9D7S1 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms