Protein–RNA interactions for Protein: Q9D6I0

Rtl8c, Cxx1c protein, mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl8cQ9D6I0 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rtl8cQ9D6I0 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rtl8cQ9D6I0 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Rtl8cQ9D6I0 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rtl8cQ9D6I0 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rtl8cQ9D6I0 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rtl8cQ9D6I0 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Rtl8cQ9D6I0 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
Rtl8cQ9D6I0 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rtl8cQ9D6I0 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.14■□□□□ 0.33
Rtl8cQ9D6I0 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rtl8cQ9D6I0 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rtl8cQ9D6I0 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rtl8cQ9D6I0 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Rtl8cQ9D6I0 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rtl8cQ9D6I0 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC17.14■□□□□ 0.33
Rtl8cQ9D6I0 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rtl8cQ9D6I0 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rtl8cQ9D6I0 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rtl8cQ9D6I0 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rtl8cQ9D6I0 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rtl8cQ9D6I0 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rtl8cQ9D6I0 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Rtl8cQ9D6I0 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rtl8cQ9D6I0 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rtl8cQ9D6I0 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.13■□□□□ 0.33
Rtl8cQ9D6I0 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rtl8cQ9D6I0 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Rtl8cQ9D6I0 Gm12251-201ENSMUST00000117893 792 ntBASIC17.13■□□□□ 0.33
Rtl8cQ9D6I0 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC17.13■□□□□ 0.33
Rtl8cQ9D6I0 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rtl8cQ9D6I0 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rtl8cQ9D6I0 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rtl8cQ9D6I0 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rtl8cQ9D6I0 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.13■□□□□ 0.33
Rtl8cQ9D6I0 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.13■□□□□ 0.33
Rtl8cQ9D6I0 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rtl8cQ9D6I0 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.13■□□□□ 0.33
Rtl8cQ9D6I0 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rtl8cQ9D6I0 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rtl8cQ9D6I0 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rtl8cQ9D6I0 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rtl8cQ9D6I0 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.12■□□□□ 0.33
Rtl8cQ9D6I0 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rtl8cQ9D6I0 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rtl8cQ9D6I0 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.12■□□□□ 0.33
Rtl8cQ9D6I0 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rtl8cQ9D6I0 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rtl8cQ9D6I0 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rtl8cQ9D6I0 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rtl8cQ9D6I0 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtl8cQ9D6I0 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Rtl8cQ9D6I0 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtl8cQ9D6I0 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rtl8cQ9D6I0 Gm27454-201ENSMUST00000185090 204 ntBASIC17.11■□□□□ 0.33
Rtl8cQ9D6I0 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.11■□□□□ 0.33
Rtl8cQ9D6I0 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtl8cQ9D6I0 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtl8cQ9D6I0 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Rtl8cQ9D6I0 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtl8cQ9D6I0 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Rtl8cQ9D6I0 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Rtl8cQ9D6I0 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtl8cQ9D6I0 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Rtl8cQ9D6I0 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.1■□□□□ 0.33
Rtl8cQ9D6I0 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rtl8cQ9D6I0 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rtl8cQ9D6I0 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rtl8cQ9D6I0 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rtl8cQ9D6I0 Gm43173-201ENSMUST00000202246 593 ntBASIC17.1■□□□□ 0.33
Rtl8cQ9D6I0 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.1■□□□□ 0.33
Rtl8cQ9D6I0 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Rtl8cQ9D6I0 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rtl8cQ9D6I0 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rtl8cQ9D6I0 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Rtl8cQ9D6I0 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rtl8cQ9D6I0 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Rtl8cQ9D6I0 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Rtl8cQ9D6I0 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rtl8cQ9D6I0 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rtl8cQ9D6I0 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.09■□□□□ 0.33
Rtl8cQ9D6I0 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Rtl8cQ9D6I0 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rtl8cQ9D6I0 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rtl8cQ9D6I0 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rtl8cQ9D6I0 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rtl8cQ9D6I0 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rtl8cQ9D6I0 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rtl8cQ9D6I0 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rtl8cQ9D6I0 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rtl8cQ9D6I0 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rtl8cQ9D6I0 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rtl8cQ9D6I0 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rtl8cQ9D6I0 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rtl8cQ9D6I0 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rtl8cQ9D6I0 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rtl8cQ9D6I0 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rtl8cQ9D6I0 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Rtl8cQ9D6I0 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rtl8cQ9D6I0 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms