Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Sf3a3Q9D554 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Sf3a3Q9D554 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sf3a3Q9D554 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Sf3a3Q9D554 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sf3a3Q9D554 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sf3a3Q9D554 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Sf3a3Q9D554 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Sf3a3Q9D554 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sf3a3Q9D554 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sf3a3Q9D554 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sf3a3Q9D554 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sf3a3Q9D554 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sf3a3Q9D554 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Sf3a3Q9D554 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Sf3a3Q9D554 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sf3a3Q9D554 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.47■□□□□ 0.71
Sf3a3Q9D554 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Sf3a3Q9D554 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sf3a3Q9D554 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sf3a3Q9D554 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Sf3a3Q9D554 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.47■□□□□ 0.71
Sf3a3Q9D554 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sf3a3Q9D554 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sf3a3Q9D554 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sf3a3Q9D554 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sf3a3Q9D554 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.47■□□□□ 0.71
Sf3a3Q9D554 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sf3a3Q9D554 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Sf3a3Q9D554 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.46■□□□□ 0.71
Sf3a3Q9D554 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Sf3a3Q9D554 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sf3a3Q9D554 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sf3a3Q9D554 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Sf3a3Q9D554 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sf3a3Q9D554 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sf3a3Q9D554 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sf3a3Q9D554 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sf3a3Q9D554 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.45■□□□□ 0.7
Sf3a3Q9D554 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Sf3a3Q9D554 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.45■□□□□ 0.7
Sf3a3Q9D554 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Sf3a3Q9D554 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.45■□□□□ 0.7
Sf3a3Q9D554 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sf3a3Q9D554 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Sf3a3Q9D554 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Sf3a3Q9D554 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sf3a3Q9D554 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sf3a3Q9D554 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sf3a3Q9D554 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.44■□□□□ 0.7
Sf3a3Q9D554 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sf3a3Q9D554 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sf3a3Q9D554 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sf3a3Q9D554 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sf3a3Q9D554 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Sf3a3Q9D554 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Sf3a3Q9D554 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC19.44■□□□□ 0.7
Sf3a3Q9D554 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Sf3a3Q9D554 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Sf3a3Q9D554 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.43■□□□□ 0.7
Sf3a3Q9D554 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Sf3a3Q9D554 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sf3a3Q9D554 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Sf3a3Q9D554 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sf3a3Q9D554 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Sf3a3Q9D554 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sf3a3Q9D554 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sf3a3Q9D554 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sf3a3Q9D554 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sf3a3Q9D554 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sf3a3Q9D554 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sf3a3Q9D554 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sf3a3Q9D554 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sf3a3Q9D554 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sf3a3Q9D554 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sf3a3Q9D554 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.42■□□□□ 0.7
Sf3a3Q9D554 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.42■□□□□ 0.7
Sf3a3Q9D554 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sf3a3Q9D554 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sf3a3Q9D554 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sf3a3Q9D554 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sf3a3Q9D554 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sf3a3Q9D554 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Sf3a3Q9D554 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Sf3a3Q9D554 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sf3a3Q9D554 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.41■□□□□ 0.7
Sf3a3Q9D554 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Sf3a3Q9D554 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sf3a3Q9D554 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sf3a3Q9D554 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sf3a3Q9D554 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.41■□□□□ 0.7
Sf3a3Q9D554 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.41■□□□□ 0.7
Sf3a3Q9D554 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Sf3a3Q9D554 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sf3a3Q9D554 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Sf3a3Q9D554 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sf3a3Q9D554 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Sf3a3Q9D554 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sf3a3Q9D554 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Sf3a3Q9D554 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms