Protein–RNA interactions for Protein: Q9D548

Zcchc13, Cellular nucleic acid binding protein 2, mousemouse

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc13Q9D548 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Zcchc13Q9D548 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Zcchc13Q9D548 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Zcchc13Q9D548 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Zcchc13Q9D548 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Zcchc13Q9D548 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Zcchc13Q9D548 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Zcchc13Q9D548 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Zcchc13Q9D548 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Zcchc13Q9D548 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Zcchc13Q9D548 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Zcchc13Q9D548 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Zcchc13Q9D548 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Zcchc13Q9D548 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC12.16□□□□□ -0.46
Zcchc13Q9D548 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC12.16□□□□□ -0.46
Zcchc13Q9D548 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Zcchc13Q9D548 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Zcchc13Q9D548 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC12.16□□□□□ -0.46
Zcchc13Q9D548 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Zcchc13Q9D548 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Zcchc13Q9D548 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC12.16□□□□□ -0.46
Zcchc13Q9D548 Cdc34b-202ENSMUST00000188741 1252 ntBASIC12.16□□□□□ -0.46
Zcchc13Q9D548 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC12.16□□□□□ -0.46
Zcchc13Q9D548 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Zcchc13Q9D548 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Zcchc13Q9D548 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC12.16□□□□□ -0.46
Zcchc13Q9D548 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Zcchc13Q9D548 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Zcchc13Q9D548 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Zcchc13Q9D548 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Zcchc13Q9D548 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Zcchc13Q9D548 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Zcchc13Q9D548 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Zcchc13Q9D548 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Zcchc13Q9D548 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Zcchc13Q9D548 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Zcchc13Q9D548 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Zcchc13Q9D548 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Zcchc13Q9D548 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Zcchc13Q9D548 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Zcchc13Q9D548 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC12.15□□□□□ -0.46
Zcchc13Q9D548 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Zcchc13Q9D548 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Zcchc13Q9D548 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Zcchc13Q9D548 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Zcchc13Q9D548 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Zcchc13Q9D548 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Zcchc13Q9D548 Gm40848-201ENSMUST00000221998 324 ntBASIC12.15□□□□□ -0.46
Zcchc13Q9D548 AC124603.1-201ENSMUST00000223843 308 ntBASIC12.15□□□□□ -0.46
Zcchc13Q9D548 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Zcchc13Q9D548 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Zcchc13Q9D548 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Zcchc13Q9D548 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Zcchc13Q9D548 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Zcchc13Q9D548 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Zcchc13Q9D548 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Zcchc13Q9D548 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Zcchc13Q9D548 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Zcchc13Q9D548 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Zcchc13Q9D548 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Zcchc13Q9D548 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Zcchc13Q9D548 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Zcchc13Q9D548 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
Zcchc13Q9D548 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Zcchc13Q9D548 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Zcchc13Q9D548 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Zcchc13Q9D548 Gm21168-201ENSMUST00000199646 1096 ntBASIC12.14□□□□□ -0.47
Zcchc13Q9D548 Gm43060-201ENSMUST00000200621 289 ntBASIC12.14□□□□□ -0.47
Zcchc13Q9D548 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Zcchc13Q9D548 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Zcchc13Q9D548 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Zcchc13Q9D548 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Zcchc13Q9D548 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Zcchc13Q9D548 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Zcchc13Q9D548 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Zcchc13Q9D548 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Zcchc13Q9D548 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Zcchc13Q9D548 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Zcchc13Q9D548 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Zcchc13Q9D548 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Zcchc13Q9D548 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Zcchc13Q9D548 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Zcchc13Q9D548 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Zcchc13Q9D548 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Zcchc13Q9D548 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC12.13□□□□□ -0.47
Zcchc13Q9D548 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Zcchc13Q9D548 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC12.13□□□□□ -0.47
Zcchc13Q9D548 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Zcchc13Q9D548 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Zcchc13Q9D548 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Zcchc13Q9D548 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC12.13□□□□□ -0.47
Zcchc13Q9D548 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Zcchc13Q9D548 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC12.13□□□□□ -0.47
Zcchc13Q9D548 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Zcchc13Q9D548 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC12.13□□□□□ -0.47
Zcchc13Q9D548 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Zcchc13Q9D548 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Zcchc13Q9D548 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Zcchc13Q9D548 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Zcchc13Q9D548 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms