Protein–RNA interactions for Protein: Q9D3I0

5530400C23Rik, RIKEN cDNA 5530400C23 gene, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
5530400C23RikQ9D3I0 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
5530400C23RikQ9D3I0 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
5530400C23RikQ9D3I0 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
5530400C23RikQ9D3I0 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
5530400C23RikQ9D3I0 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
5530400C23RikQ9D3I0 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
5530400C23RikQ9D3I0 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
5530400C23RikQ9D3I0 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
5530400C23RikQ9D3I0 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
5530400C23RikQ9D3I0 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
5530400C23RikQ9D3I0 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.81■□□□□ 0.6
5530400C23RikQ9D3I0 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
5530400C23RikQ9D3I0 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
5530400C23RikQ9D3I0 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
5530400C23RikQ9D3I0 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
5530400C23RikQ9D3I0 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
5530400C23RikQ9D3I0 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.81■□□□□ 0.6
5530400C23RikQ9D3I0 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
5530400C23RikQ9D3I0 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.8■□□□□ 0.6
5530400C23RikQ9D3I0 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
5530400C23RikQ9D3I0 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
5530400C23RikQ9D3I0 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
5530400C23RikQ9D3I0 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.8■□□□□ 0.6
5530400C23RikQ9D3I0 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
5530400C23RikQ9D3I0 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
5530400C23RikQ9D3I0 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
5530400C23RikQ9D3I0 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
5530400C23RikQ9D3I0 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
5530400C23RikQ9D3I0 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
5530400C23RikQ9D3I0 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
5530400C23RikQ9D3I0 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
5530400C23RikQ9D3I0 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
5530400C23RikQ9D3I0 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.79■□□□□ 0.6
5530400C23RikQ9D3I0 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
5530400C23RikQ9D3I0 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
5530400C23RikQ9D3I0 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
5530400C23RikQ9D3I0 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
5530400C23RikQ9D3I0 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
5530400C23RikQ9D3I0 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
5530400C23RikQ9D3I0 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.78■□□□□ 0.6
5530400C23RikQ9D3I0 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.78■□□□□ 0.6
5530400C23RikQ9D3I0 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
5530400C23RikQ9D3I0 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.78■□□□□ 0.6
5530400C23RikQ9D3I0 Gm43060-201ENSMUST00000200621 289 ntBASIC18.78■□□□□ 0.6
5530400C23RikQ9D3I0 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.78■□□□□ 0.6
5530400C23RikQ9D3I0 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
5530400C23RikQ9D3I0 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
5530400C23RikQ9D3I0 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.78■□□□□ 0.6
5530400C23RikQ9D3I0 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
5530400C23RikQ9D3I0 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
5530400C23RikQ9D3I0 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
5530400C23RikQ9D3I0 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
5530400C23RikQ9D3I0 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
5530400C23RikQ9D3I0 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.78■□□□□ 0.6
5530400C23RikQ9D3I0 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.78■□□□□ 0.6
5530400C23RikQ9D3I0 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
5530400C23RikQ9D3I0 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
5530400C23RikQ9D3I0 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
5530400C23RikQ9D3I0 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
5530400C23RikQ9D3I0 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
5530400C23RikQ9D3I0 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
5530400C23RikQ9D3I0 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
5530400C23RikQ9D3I0 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
5530400C23RikQ9D3I0 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.77■□□□□ 0.6
5530400C23RikQ9D3I0 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
5530400C23RikQ9D3I0 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
5530400C23RikQ9D3I0 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
5530400C23RikQ9D3I0 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
5530400C23RikQ9D3I0 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
5530400C23RikQ9D3I0 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
5530400C23RikQ9D3I0 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
5530400C23RikQ9D3I0 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
5530400C23RikQ9D3I0 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
5530400C23RikQ9D3I0 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
5530400C23RikQ9D3I0 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
5530400C23RikQ9D3I0 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
5530400C23RikQ9D3I0 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
5530400C23RikQ9D3I0 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
5530400C23RikQ9D3I0 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
5530400C23RikQ9D3I0 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
5530400C23RikQ9D3I0 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.75■□□□□ 0.59
5530400C23RikQ9D3I0 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
5530400C23RikQ9D3I0 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.75■□□□□ 0.59
5530400C23RikQ9D3I0 Gm27801-201ENSMUST00000184174 223 ntBASIC18.75■□□□□ 0.59
5530400C23RikQ9D3I0 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.75■□□□□ 0.59
5530400C23RikQ9D3I0 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
5530400C23RikQ9D3I0 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.75■□□□□ 0.59
5530400C23RikQ9D3I0 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
5530400C23RikQ9D3I0 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
5530400C23RikQ9D3I0 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
5530400C23RikQ9D3I0 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.75■□□□□ 0.59
5530400C23RikQ9D3I0 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
5530400C23RikQ9D3I0 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
5530400C23RikQ9D3I0 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
5530400C23RikQ9D3I0 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
5530400C23RikQ9D3I0 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
5530400C23RikQ9D3I0 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
5530400C23RikQ9D3I0 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
5530400C23RikQ9D3I0 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
5530400C23RikQ9D3I0 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms