Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim42Q9D2H5 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.12■□□□□ 0.65
Trim42Q9D2H5 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim42Q9D2H5 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim42Q9D2H5 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim42Q9D2H5 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trim42Q9D2H5 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim42Q9D2H5 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim42Q9D2H5 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim42Q9D2H5 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
Trim42Q9D2H5 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim42Q9D2H5 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trim42Q9D2H5 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
Trim42Q9D2H5 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim42Q9D2H5 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Trim42Q9D2H5 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trim42Q9D2H5 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim42Q9D2H5 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trim42Q9D2H5 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim42Q9D2H5 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trim42Q9D2H5 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trim42Q9D2H5 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim42Q9D2H5 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Trim42Q9D2H5 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim42Q9D2H5 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Trim42Q9D2H5 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim42Q9D2H5 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Trim42Q9D2H5 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim42Q9D2H5 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim42Q9D2H5 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim42Q9D2H5 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim42Q9D2H5 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim42Q9D2H5 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trim42Q9D2H5 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
Trim42Q9D2H5 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim42Q9D2H5 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trim42Q9D2H5 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim42Q9D2H5 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim42Q9D2H5 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim42Q9D2H5 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trim42Q9D2H5 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim42Q9D2H5 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.09■□□□□ 0.65
Trim42Q9D2H5 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim42Q9D2H5 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Trim42Q9D2H5 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trim42Q9D2H5 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim42Q9D2H5 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim42Q9D2H5 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.09■□□□□ 0.65
Trim42Q9D2H5 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim42Q9D2H5 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim42Q9D2H5 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trim42Q9D2H5 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trim42Q9D2H5 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trim42Q9D2H5 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Trim42Q9D2H5 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.08■□□□□ 0.64
Trim42Q9D2H5 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim42Q9D2H5 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.64
Trim42Q9D2H5 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim42Q9D2H5 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Trim42Q9D2H5 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim42Q9D2H5 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trim42Q9D2H5 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim42Q9D2H5 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Trim42Q9D2H5 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim42Q9D2H5 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Trim42Q9D2H5 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim42Q9D2H5 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim42Q9D2H5 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
Trim42Q9D2H5 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trim42Q9D2H5 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim42Q9D2H5 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim42Q9D2H5 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim42Q9D2H5 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trim42Q9D2H5 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Trim42Q9D2H5 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.07■□□□□ 0.64
Trim42Q9D2H5 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim42Q9D2H5 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim42Q9D2H5 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trim42Q9D2H5 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.06■□□□□ 0.64
Trim42Q9D2H5 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.06■□□□□ 0.64
Trim42Q9D2H5 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim42Q9D2H5 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim42Q9D2H5 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Trim42Q9D2H5 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim42Q9D2H5 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trim42Q9D2H5 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.06■□□□□ 0.64
Trim42Q9D2H5 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.06■□□□□ 0.64
Trim42Q9D2H5 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim42Q9D2H5 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim42Q9D2H5 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trim42Q9D2H5 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Trim42Q9D2H5 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim42Q9D2H5 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
Trim42Q9D2H5 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim42Q9D2H5 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim42Q9D2H5 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Trim42Q9D2H5 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trim42Q9D2H5 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Trim42Q9D2H5 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trim42Q9D2H5 Gm43530-201ENSMUST00000195920 274 ntBASIC19.05■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms