Protein–RNA interactions for Protein: Q9D1H0

Rita1, RBPJ-interacting and tubulin-associated protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rita1Q9D1H0 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rita1Q9D1H0 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.76■□□□□ 0.43
Rita1Q9D1H0 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rita1Q9D1H0 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.76■□□□□ 0.43
Rita1Q9D1H0 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rita1Q9D1H0 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rita1Q9D1H0 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rita1Q9D1H0 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rita1Q9D1H0 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rita1Q9D1H0 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rita1Q9D1H0 Gm7860-201ENSMUST00000121190 879 ntBASIC17.75■□□□□ 0.43
Rita1Q9D1H0 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rita1Q9D1H0 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.75■□□□□ 0.43
Rita1Q9D1H0 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.75■□□□□ 0.43
Rita1Q9D1H0 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Rita1Q9D1H0 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rita1Q9D1H0 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rita1Q9D1H0 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rita1Q9D1H0 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rita1Q9D1H0 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rita1Q9D1H0 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rita1Q9D1H0 Golph3-202ENSMUST00000226517 2359 ntBASIC17.74■□□□□ 0.43
Rita1Q9D1H0 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Rita1Q9D1H0 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rita1Q9D1H0 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rita1Q9D1H0 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.74■□□□□ 0.43
Rita1Q9D1H0 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rita1Q9D1H0 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Rita1Q9D1H0 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rita1Q9D1H0 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Rita1Q9D1H0 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rita1Q9D1H0 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Rita1Q9D1H0 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.74■□□□□ 0.43
Rita1Q9D1H0 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rita1Q9D1H0 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rita1Q9D1H0 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rita1Q9D1H0 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rita1Q9D1H0 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rita1Q9D1H0 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
Rita1Q9D1H0 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rita1Q9D1H0 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rita1Q9D1H0 Gm20634-201ENSMUST00000090779 2956 ntBASIC17.73■□□□□ 0.43
Rita1Q9D1H0 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Rita1Q9D1H0 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Rita1Q9D1H0 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rita1Q9D1H0 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rita1Q9D1H0 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Rita1Q9D1H0 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rita1Q9D1H0 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.73■□□□□ 0.43
Rita1Q9D1H0 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.73■□□□□ 0.43
Rita1Q9D1H0 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.73■□□□□ 0.43
Rita1Q9D1H0 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.73■□□□□ 0.43
Rita1Q9D1H0 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.73■□□□□ 0.43
Rita1Q9D1H0 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rita1Q9D1H0 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rita1Q9D1H0 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rita1Q9D1H0 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
Rita1Q9D1H0 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Rita1Q9D1H0 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rita1Q9D1H0 Gm13146-201ENSMUST00000118508 780 ntBASIC17.72■□□□□ 0.43
Rita1Q9D1H0 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Rita1Q9D1H0 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.72■□□□□ 0.43
Rita1Q9D1H0 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Rita1Q9D1H0 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
Rita1Q9D1H0 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rita1Q9D1H0 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rita1Q9D1H0 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rita1Q9D1H0 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rita1Q9D1H0 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.72■□□□□ 0.43
Rita1Q9D1H0 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rita1Q9D1H0 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.71■□□□□ 0.43
Rita1Q9D1H0 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.71■□□□□ 0.43
Rita1Q9D1H0 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.71■□□□□ 0.43
Rita1Q9D1H0 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Rita1Q9D1H0 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rita1Q9D1H0 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Rita1Q9D1H0 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rita1Q9D1H0 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.7■□□□□ 0.42
Rita1Q9D1H0 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Rita1Q9D1H0 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rita1Q9D1H0 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Rita1Q9D1H0 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rita1Q9D1H0 Gm37179-201ENSMUST00000194862 823 ntBASIC17.7■□□□□ 0.42
Rita1Q9D1H0 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.7■□□□□ 0.42
Rita1Q9D1H0 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rita1Q9D1H0 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Rita1Q9D1H0 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rita1Q9D1H0 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rita1Q9D1H0 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rita1Q9D1H0 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.69■□□□□ 0.42
Rita1Q9D1H0 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rita1Q9D1H0 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rita1Q9D1H0 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rita1Q9D1H0 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.69■□□□□ 0.42
Rita1Q9D1H0 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rita1Q9D1H0 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rita1Q9D1H0 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rita1Q9D1H0 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rita1Q9D1H0 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rita1Q9D1H0 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms