Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.27■□□□□ 0.52
Upk1aQ9D132 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.27■□□□□ 0.52
Upk1aQ9D132 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Upk1aQ9D132 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Upk1aQ9D132 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Upk1aQ9D132 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Upk1aQ9D132 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Upk1aQ9D132 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Upk1aQ9D132 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Upk1aQ9D132 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Upk1aQ9D132 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Upk1aQ9D132 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Upk1aQ9D132 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.26■□□□□ 0.51
Upk1aQ9D132 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Upk1aQ9D132 Gm7417-201ENSMUST00000192950 473 ntBASIC18.26■□□□□ 0.51
Upk1aQ9D132 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Upk1aQ9D132 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Upk1aQ9D132 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.26■□□□□ 0.51
Upk1aQ9D132 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Upk1aQ9D132 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.25■□□□□ 0.51
Upk1aQ9D132 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Upk1aQ9D132 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.25■□□□□ 0.51
Upk1aQ9D132 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.25■□□□□ 0.51
Upk1aQ9D132 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Upk1aQ9D132 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Upk1aQ9D132 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Upk1aQ9D132 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Upk1aQ9D132 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Upk1aQ9D132 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Upk1aQ9D132 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.24■□□□□ 0.51
Upk1aQ9D132 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Upk1aQ9D132 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Upk1aQ9D132 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC18.24■□□□□ 0.51
Upk1aQ9D132 Gm15546-201ENSMUST00000122095 826 ntBASIC18.24■□□□□ 0.51
Upk1aQ9D132 Etf1-202ENSMUST00000180351 108 ntBASIC18.24■□□□□ 0.51
Upk1aQ9D132 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Upk1aQ9D132 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Upk1aQ9D132 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Upk1aQ9D132 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Upk1aQ9D132 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Upk1aQ9D132 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Upk1aQ9D132 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Upk1aQ9D132 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Upk1aQ9D132 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Upk1aQ9D132 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.23■□□□□ 0.51
Upk1aQ9D132 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Upk1aQ9D132 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Upk1aQ9D132 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Upk1aQ9D132 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Upk1aQ9D132 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Upk1aQ9D132 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Upk1aQ9D132 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Upk1aQ9D132 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Upk1aQ9D132 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Upk1aQ9D132 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Upk1aQ9D132 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Upk1aQ9D132 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Upk1aQ9D132 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Upk1aQ9D132 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Upk1aQ9D132 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.22■□□□□ 0.51
Upk1aQ9D132 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Upk1aQ9D132 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.22■□□□□ 0.51
Upk1aQ9D132 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Upk1aQ9D132 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Upk1aQ9D132 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Upk1aQ9D132 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Upk1aQ9D132 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Upk1aQ9D132 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Upk1aQ9D132 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Upk1aQ9D132 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Upk1aQ9D132 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Upk1aQ9D132 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Upk1aQ9D132 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.21■□□□□ 0.51
Upk1aQ9D132 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Upk1aQ9D132 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Upk1aQ9D132 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Upk1aQ9D132 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Upk1aQ9D132 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.21■□□□□ 0.51
Upk1aQ9D132 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Upk1aQ9D132 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Upk1aQ9D132 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.21■□□□□ 0.51
Upk1aQ9D132 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Upk1aQ9D132 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Upk1aQ9D132 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Upk1aQ9D132 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Upk1aQ9D132 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Upk1aQ9D132 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Upk1aQ9D132 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Upk1aQ9D132 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.2■□□□□ 0.5
Upk1aQ9D132 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.2■□□□□ 0.5
Upk1aQ9D132 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Upk1aQ9D132 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Upk1aQ9D132 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Upk1aQ9D132 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Upk1aQ9D132 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Upk1aQ9D132 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.19■□□□□ 0.5
Upk1aQ9D132 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Upk1aQ9D132 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.19■□□□□ 0.5
Upk1aQ9D132 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.19■□□□□ 0.5
Upk1aQ9D132 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms