Protein–RNA interactions for Protein: Q9D0F1

Ndc80, Kinetochore protein NDC80 homolog, mousemouse

Known RBP Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc80Q9D0F1 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ndc80Q9D0F1 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ndc80Q9D0F1 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ndc80Q9D0F1 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ndc80Q9D0F1 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ndc80Q9D0F1 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ndc80Q9D0F1 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ndc80Q9D0F1 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ndc80Q9D0F1 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ndc80Q9D0F1 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.47■□□□□ 0.71
Ndc80Q9D0F1 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Ndc80Q9D0F1 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ndc80Q9D0F1 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.46■□□□□ 0.71
Ndc80Q9D0F1 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ndc80Q9D0F1 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ndc80Q9D0F1 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ndc80Q9D0F1 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ndc80Q9D0F1 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.45■□□□□ 0.7
Ndc80Q9D0F1 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ndc80Q9D0F1 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
Ndc80Q9D0F1 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ndc80Q9D0F1 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.45■□□□□ 0.7
Ndc80Q9D0F1 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ndc80Q9D0F1 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.45■□□□□ 0.7
Ndc80Q9D0F1 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ndc80Q9D0F1 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.45■□□□□ 0.7
Ndc80Q9D0F1 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ndc80Q9D0F1 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ndc80Q9D0F1 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ndc80Q9D0F1 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ndc80Q9D0F1 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ndc80Q9D0F1 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ndc80Q9D0F1 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
Ndc80Q9D0F1 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.44■□□□□ 0.7
Ndc80Q9D0F1 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ndc80Q9D0F1 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ndc80Q9D0F1 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ndc80Q9D0F1 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ndc80Q9D0F1 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
Ndc80Q9D0F1 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ndc80Q9D0F1 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.44■□□□□ 0.7
Ndc80Q9D0F1 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ndc80Q9D0F1 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ndc80Q9D0F1 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ndc80Q9D0F1 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
Ndc80Q9D0F1 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.43■□□□□ 0.7
Ndc80Q9D0F1 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ndc80Q9D0F1 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ndc80Q9D0F1 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ndc80Q9D0F1 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ndc80Q9D0F1 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Ndc80Q9D0F1 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ndc80Q9D0F1 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ndc80Q9D0F1 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ndc80Q9D0F1 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ndc80Q9D0F1 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.42■□□□□ 0.7
Ndc80Q9D0F1 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ndc80Q9D0F1 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ndc80Q9D0F1 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ndc80Q9D0F1 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Ndc80Q9D0F1 Serp2-204ENSMUST00000228055 705 ntBASIC19.42■□□□□ 0.7
Ndc80Q9D0F1 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ndc80Q9D0F1 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Ndc80Q9D0F1 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ndc80Q9D0F1 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ndc80Q9D0F1 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ndc80Q9D0F1 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ndc80Q9D0F1 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ndc80Q9D0F1 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ndc80Q9D0F1 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ndc80Q9D0F1 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ndc80Q9D0F1 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ndc80Q9D0F1 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Ndc80Q9D0F1 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ndc80Q9D0F1 Smad6-203ENSMUST00000179458 273 ntBASIC19.41■□□□□ 0.7
Ndc80Q9D0F1 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.41■□□□□ 0.7
Ndc80Q9D0F1 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ndc80Q9D0F1 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ndc80Q9D0F1 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ndc80Q9D0F1 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ndc80Q9D0F1 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Ndc80Q9D0F1 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Ndc80Q9D0F1 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ndc80Q9D0F1 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ndc80Q9D0F1 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Ndc80Q9D0F1 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ndc80Q9D0F1 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ndc80Q9D0F1 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
Ndc80Q9D0F1 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Ndc80Q9D0F1 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
Ndc80Q9D0F1 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ndc80Q9D0F1 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
Ndc80Q9D0F1 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Ndc80Q9D0F1 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.39■□□□□ 0.69
Ndc80Q9D0F1 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Ndc80Q9D0F1 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ndc80Q9D0F1 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ndc80Q9D0F1 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ndc80Q9D0F1 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ndc80Q9D0F1 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms