Protein–RNA interactions for Protein: Q9CZQ6

Raet1e, Retinoic acid early-inducible protein 1-epsilon, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1eQ9CZQ6 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Raet1eQ9CZQ6 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Raet1eQ9CZQ6 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Raet1eQ9CZQ6 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC16.89■□□□□ 0.29
Raet1eQ9CZQ6 Gm12366-201ENSMUST00000121722 873 ntBASIC16.89■□□□□ 0.29
Raet1eQ9CZQ6 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC16.89■□□□□ 0.29
Raet1eQ9CZQ6 Nsd1-203ENSMUST00000224156 1149 ntBASIC16.89■□□□□ 0.29
Raet1eQ9CZQ6 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.89■□□□□ 0.29
Raet1eQ9CZQ6 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC16.89■□□□□ 0.29
Raet1eQ9CZQ6 Gm5786-201ENSMUST00000085368 882 ntBASIC16.89■□□□□ 0.29
Raet1eQ9CZQ6 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Raet1eQ9CZQ6 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Raet1eQ9CZQ6 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Raet1eQ9CZQ6 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Raet1eQ9CZQ6 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Raet1eQ9CZQ6 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.88■□□□□ 0.29
Raet1eQ9CZQ6 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Raet1eQ9CZQ6 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Raet1eQ9CZQ6 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Raet1eQ9CZQ6 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Raet1eQ9CZQ6 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Raet1eQ9CZQ6 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Raet1eQ9CZQ6 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Raet1eQ9CZQ6 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Raet1eQ9CZQ6 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Raet1eQ9CZQ6 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Raet1eQ9CZQ6 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Raet1eQ9CZQ6 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Raet1eQ9CZQ6 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Raet1eQ9CZQ6 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Raet1eQ9CZQ6 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Raet1eQ9CZQ6 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Raet1eQ9CZQ6 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Raet1eQ9CZQ6 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Raet1eQ9CZQ6 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Raet1eQ9CZQ6 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.87■□□□□ 0.29
Raet1eQ9CZQ6 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Raet1eQ9CZQ6 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Raet1eQ9CZQ6 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Raet1eQ9CZQ6 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.87■□□□□ 0.29
Raet1eQ9CZQ6 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.87■□□□□ 0.29
Raet1eQ9CZQ6 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC16.87■□□□□ 0.29
Raet1eQ9CZQ6 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Raet1eQ9CZQ6 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC16.87■□□□□ 0.29
Raet1eQ9CZQ6 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Raet1eQ9CZQ6 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Raet1eQ9CZQ6 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Raet1eQ9CZQ6 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Raet1eQ9CZQ6 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
Raet1eQ9CZQ6 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Raet1eQ9CZQ6 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Raet1eQ9CZQ6 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Raet1eQ9CZQ6 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Raet1eQ9CZQ6 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Raet1eQ9CZQ6 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Raet1eQ9CZQ6 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Raet1eQ9CZQ6 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Raet1eQ9CZQ6 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Raet1eQ9CZQ6 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Raet1eQ9CZQ6 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Raet1eQ9CZQ6 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Raet1eQ9CZQ6 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Raet1eQ9CZQ6 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Raet1eQ9CZQ6 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Raet1eQ9CZQ6 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Raet1eQ9CZQ6 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Raet1eQ9CZQ6 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Raet1eQ9CZQ6 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Raet1eQ9CZQ6 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Raet1eQ9CZQ6 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Raet1eQ9CZQ6 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Raet1eQ9CZQ6 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Raet1eQ9CZQ6 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Raet1eQ9CZQ6 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.85■□□□□ 0.29
Raet1eQ9CZQ6 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Raet1eQ9CZQ6 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Raet1eQ9CZQ6 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC16.85■□□□□ 0.29
Raet1eQ9CZQ6 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Raet1eQ9CZQ6 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Raet1eQ9CZQ6 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.85■□□□□ 0.29
Raet1eQ9CZQ6 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Raet1eQ9CZQ6 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Raet1eQ9CZQ6 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Raet1eQ9CZQ6 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Raet1eQ9CZQ6 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Raet1eQ9CZQ6 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Raet1eQ9CZQ6 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Raet1eQ9CZQ6 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Raet1eQ9CZQ6 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Raet1eQ9CZQ6 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Raet1eQ9CZQ6 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC16.84■□□□□ 0.29
Raet1eQ9CZQ6 Gm5067-201ENSMUST00000170449 1009 ntBASIC16.84■□□□□ 0.29
Raet1eQ9CZQ6 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Raet1eQ9CZQ6 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Raet1eQ9CZQ6 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Raet1eQ9CZQ6 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.84■□□□□ 0.29
Raet1eQ9CZQ6 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Raet1eQ9CZQ6 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Raet1eQ9CZQ6 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Raet1eQ9CZQ6 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms