Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
Snf8Q9CZ28 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Snf8Q9CZ28 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.74■□□□□ 0.75
Snf8Q9CZ28 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Snf8Q9CZ28 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Snf8Q9CZ28 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Snf8Q9CZ28 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Snf8Q9CZ28 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Snf8Q9CZ28 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Snf8Q9CZ28 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Snf8Q9CZ28 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Snf8Q9CZ28 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Snf8Q9CZ28 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Snf8Q9CZ28 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.73■□□□□ 0.75
Snf8Q9CZ28 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.73■□□□□ 0.75
Snf8Q9CZ28 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Snf8Q9CZ28 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Snf8Q9CZ28 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Snf8Q9CZ28 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Snf8Q9CZ28 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Snf8Q9CZ28 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Snf8Q9CZ28 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Snf8Q9CZ28 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.72■□□□□ 0.75
Snf8Q9CZ28 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Snf8Q9CZ28 Gm14117-201ENSMUST00000122417 843 ntBASIC19.72■□□□□ 0.75
Snf8Q9CZ28 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.72■□□□□ 0.75
Snf8Q9CZ28 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Snf8Q9CZ28 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Snf8Q9CZ28 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
Snf8Q9CZ28 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Snf8Q9CZ28 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Snf8Q9CZ28 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Snf8Q9CZ28 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Snf8Q9CZ28 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Snf8Q9CZ28 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Snf8Q9CZ28 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Snf8Q9CZ28 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Snf8Q9CZ28 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.71■□□□□ 0.75
Snf8Q9CZ28 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Snf8Q9CZ28 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Snf8Q9CZ28 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Snf8Q9CZ28 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Snf8Q9CZ28 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Snf8Q9CZ28 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Snf8Q9CZ28 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.7■□□□□ 0.74
Snf8Q9CZ28 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Snf8Q9CZ28 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Snf8Q9CZ28 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Snf8Q9CZ28 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Snf8Q9CZ28 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Snf8Q9CZ28 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.7■□□□□ 0.74
Snf8Q9CZ28 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
Snf8Q9CZ28 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Snf8Q9CZ28 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Snf8Q9CZ28 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Snf8Q9CZ28 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Snf8Q9CZ28 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Snf8Q9CZ28 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Snf8Q9CZ28 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Snf8Q9CZ28 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Snf8Q9CZ28 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.69■□□□□ 0.74
Snf8Q9CZ28 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.69■□□□□ 0.74
Snf8Q9CZ28 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Snf8Q9CZ28 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Snf8Q9CZ28 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Snf8Q9CZ28 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Snf8Q9CZ28 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Snf8Q9CZ28 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Snf8Q9CZ28 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Snf8Q9CZ28 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.68■□□□□ 0.74
Snf8Q9CZ28 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Snf8Q9CZ28 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Snf8Q9CZ28 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Snf8Q9CZ28 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Snf8Q9CZ28 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Snf8Q9CZ28 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Snf8Q9CZ28 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Snf8Q9CZ28 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Snf8Q9CZ28 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Snf8Q9CZ28 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Snf8Q9CZ28 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Snf8Q9CZ28 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Snf8Q9CZ28 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
Snf8Q9CZ28 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Snf8Q9CZ28 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Snf8Q9CZ28 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.66■□□□□ 0.74
Snf8Q9CZ28 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.66■□□□□ 0.74
Snf8Q9CZ28 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.66■□□□□ 0.74
Snf8Q9CZ28 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Snf8Q9CZ28 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Snf8Q9CZ28 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Snf8Q9CZ28 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Snf8Q9CZ28 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.66■□□□□ 0.74
Snf8Q9CZ28 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Snf8Q9CZ28 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Snf8Q9CZ28 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
Snf8Q9CZ28 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Snf8Q9CZ28 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Snf8Q9CZ28 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Snf8Q9CZ28 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 91.3 ms