Protein–RNA interactions for Protein: Q9CYI0

Protein Njmu-R1, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CYI0 Gm12933-201ENSMUST00000120203 872 ntBASIC21.23■□□□□ 0.99
Q9CYI0 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Q9CYI0 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Q9CYI0 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Q9CYI0 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Q9CYI0 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Q9CYI0 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Q9CYI0 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Q9CYI0 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Q9CYI0 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Q9CYI0 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Q9CYI0 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Q9CYI0 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.22■□□□□ 0.99
Q9CYI0 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Q9CYI0 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Q9CYI0 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Q9CYI0 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Q9CYI0 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Q9CYI0 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
Q9CYI0 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Q9CYI0 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Q9CYI0 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC21.21■□□□□ 0.99
Q9CYI0 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Q9CYI0 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Q9CYI0 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Q9CYI0 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Q9CYI0 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Q9CYI0 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Q9CYI0 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Q9CYI0 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.2■□□□□ 0.98
Q9CYI0 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Q9CYI0 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Q9CYI0 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Q9CYI0 Gm7514-201ENSMUST00000209475 934 ntBASIC21.2■□□□□ 0.98
Q9CYI0 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC21.2■□□□□ 0.98
Q9CYI0 Gm10602-201ENSMUST00000098239 609 ntBASIC21.2■□□□□ 0.98
Q9CYI0 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Q9CYI0 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Q9CYI0 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Q9CYI0 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Q9CYI0 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Q9CYI0 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Q9CYI0 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Q9CYI0 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC21.19■□□□□ 0.98
Q9CYI0 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Q9CYI0 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Q9CYI0 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Q9CYI0 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Q9CYI0 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC21.19■□□□□ 0.98
Q9CYI0 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Q9CYI0 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Q9CYI0 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Q9CYI0 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Q9CYI0 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Q9CYI0 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC21.18■□□□□ 0.98
Q9CYI0 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC21.18■□□□□ 0.98
Q9CYI0 Ap3s1-204ENSMUST00000225520 957 ntBASIC21.18■□□□□ 0.98
Q9CYI0 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Q9CYI0 Golph3-202ENSMUST00000226517 2359 ntBASIC21.18■□□□□ 0.98
Q9CYI0 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Q9CYI0 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Q9CYI0 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC21.18■□□□□ 0.98
Q9CYI0 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Q9CYI0 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Q9CYI0 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC21.17■□□□□ 0.98
Q9CYI0 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Q9CYI0 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC21.17■□□□□ 0.98
Q9CYI0 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Q9CYI0 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Q9CYI0 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Q9CYI0 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Q9CYI0 CT025689.6-201ENSMUST00000224991 1104 ntBASIC21.17■□□□□ 0.98
Q9CYI0 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Q9CYI0 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Q9CYI0 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Q9CYI0 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Q9CYI0 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Q9CYI0 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Q9CYI0 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Q9CYI0 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Q9CYI0 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.16■□□□□ 0.98
Q9CYI0 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Q9CYI0 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Q9CYI0 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Q9CYI0 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Q9CYI0 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Q9CYI0 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC21.16■□□□□ 0.98
Q9CYI0 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Q9CYI0 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Q9CYI0 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Q9CYI0 Gm20100-201ENSMUST00000209418 2272 ntBASIC21.15■□□□□ 0.98
Q9CYI0 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Q9CYI0 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Q9CYI0 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Q9CYI0 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC21.15■□□□□ 0.98
Q9CYI0 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC21.15■□□□□ 0.98
Q9CYI0 CT030146.1-201ENSMUST00000220919 217 ntBASIC21.15■□□□□ 0.98
Q9CYI0 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Q9CYI0 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Q9CYI0 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms