Protein–RNA interactions for Protein: Q9CYC3

Tmem39a, Transmembrane protein 39A, mousemouse

Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem39aQ9CYC3 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Tmem39aQ9CYC3 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Tmem39aQ9CYC3 Gm22240-201ENSMUST00000175225 82 ntBASIC21.6■■□□□ 1.05
Tmem39aQ9CYC3 Gm27801-201ENSMUST00000184174 223 ntBASIC21.6■■□□□ 1.05
Tmem39aQ9CYC3 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC21.6■■□□□ 1.05
Tmem39aQ9CYC3 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Tmem39aQ9CYC3 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tmem39aQ9CYC3 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tmem39aQ9CYC3 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tmem39aQ9CYC3 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tmem39aQ9CYC3 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Tmem39aQ9CYC3 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tmem39aQ9CYC3 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC21.59■■□□□ 1.05
Tmem39aQ9CYC3 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Tmem39aQ9CYC3 Mir6236-201ENSMUST00000184437 123 ntBASIC21.59■■□□□ 1.05
Tmem39aQ9CYC3 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Tmem39aQ9CYC3 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tmem39aQ9CYC3 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tmem39aQ9CYC3 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC21.59■■□□□ 1.05
Tmem39aQ9CYC3 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
Tmem39aQ9CYC3 Gm3807-201ENSMUST00000193520 1168 ntBASIC21.58■■□□□ 1.05
Tmem39aQ9CYC3 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Tmem39aQ9CYC3 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Tmem39aQ9CYC3 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Tmem39aQ9CYC3 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Tmem39aQ9CYC3 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Tmem39aQ9CYC3 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Tmem39aQ9CYC3 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tmem39aQ9CYC3 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tmem39aQ9CYC3 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tmem39aQ9CYC3 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tmem39aQ9CYC3 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tmem39aQ9CYC3 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tmem39aQ9CYC3 Gm20760-201ENSMUST00000179197 648 ntBASIC21.57■■□□□ 1.04
Tmem39aQ9CYC3 Gm42555-201ENSMUST00000199304 1039 ntBASIC21.57■■□□□ 1.04
Tmem39aQ9CYC3 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tmem39aQ9CYC3 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Tmem39aQ9CYC3 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tmem39aQ9CYC3 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Tmem39aQ9CYC3 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Tmem39aQ9CYC3 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Tmem39aQ9CYC3 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21.56■■□□□ 1.04
Tmem39aQ9CYC3 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Tmem39aQ9CYC3 Gm43909-201ENSMUST00000203443 1876 ntBASIC21.56■■□□□ 1.04
Tmem39aQ9CYC3 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Tmem39aQ9CYC3 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC21.56■■□□□ 1.04
Tmem39aQ9CYC3 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC21.56■■□□□ 1.04
Tmem39aQ9CYC3 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
Tmem39aQ9CYC3 Gm4968-201ENSMUST00000071458 858 ntBASIC21.56■■□□□ 1.04
Tmem39aQ9CYC3 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Tmem39aQ9CYC3 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Tmem39aQ9CYC3 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Tmem39aQ9CYC3 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Tmem39aQ9CYC3 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.56■■□□□ 1.04
Tmem39aQ9CYC3 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Tmem39aQ9CYC3 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Tmem39aQ9CYC3 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC21.55■■□□□ 1.04
Tmem39aQ9CYC3 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Tmem39aQ9CYC3 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Tmem39aQ9CYC3 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tmem39aQ9CYC3 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Tmem39aQ9CYC3 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tmem39aQ9CYC3 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC21.54■■□□□ 1.04
Tmem39aQ9CYC3 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
Tmem39aQ9CYC3 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Tmem39aQ9CYC3 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Tmem39aQ9CYC3 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Tmem39aQ9CYC3 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
Tmem39aQ9CYC3 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC21.53■■□□□ 1.04
Tmem39aQ9CYC3 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Tmem39aQ9CYC3 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Tmem39aQ9CYC3 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Tmem39aQ9CYC3 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Tmem39aQ9CYC3 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Tmem39aQ9CYC3 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Tmem39aQ9CYC3 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Tmem39aQ9CYC3 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC21.53■■□□□ 1.04
Tmem39aQ9CYC3 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Tmem39aQ9CYC3 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Tmem39aQ9CYC3 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Tmem39aQ9CYC3 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Tmem39aQ9CYC3 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
Tmem39aQ9CYC3 Gm10252-201ENSMUST00000209541 832 ntBASIC21.52■■□□□ 1.04
Tmem39aQ9CYC3 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Tmem39aQ9CYC3 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
Tmem39aQ9CYC3 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC21.52■■□□□ 1.03
Tmem39aQ9CYC3 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC21.51■■□□□ 1.03
Tmem39aQ9CYC3 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Tmem39aQ9CYC3 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Tmem39aQ9CYC3 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Tmem39aQ9CYC3 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Tmem39aQ9CYC3 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Tmem39aQ9CYC3 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Tmem39aQ9CYC3 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Tmem39aQ9CYC3 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Tmem39aQ9CYC3 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Tmem39aQ9CYC3 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC21.5■■□□□ 1.03
Tmem39aQ9CYC3 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Tmem39aQ9CYC3 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC21.5■■□□□ 1.03
Tmem39aQ9CYC3 Gm8520-201ENSMUST00000186517 868 ntBASIC21.5■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms