Protein–RNA interactions for Protein: Q9CY16

Mrps28, 28S ribosomal protein S28, mitochondrial, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrps28Q9CY16 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mrps28Q9CY16 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Mrps28Q9CY16 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC17.3■□□□□ 0.36
Mrps28Q9CY16 Gm43060-201ENSMUST00000200621 289 ntBASIC17.3■□□□□ 0.36
Mrps28Q9CY16 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mrps28Q9CY16 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Mrps28Q9CY16 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mrps28Q9CY16 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Mrps28Q9CY16 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Mrps28Q9CY16 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Mrps28Q9CY16 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Mrps28Q9CY16 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.29■□□□□ 0.36
Mrps28Q9CY16 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
Mrps28Q9CY16 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mrps28Q9CY16 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mrps28Q9CY16 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mrps28Q9CY16 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Mrps28Q9CY16 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mrps28Q9CY16 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mrps28Q9CY16 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Mrps28Q9CY16 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.29■□□□□ 0.36
Mrps28Q9CY16 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Mrps28Q9CY16 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mrps28Q9CY16 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mrps28Q9CY16 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Mrps28Q9CY16 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Mrps28Q9CY16 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mrps28Q9CY16 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Mrps28Q9CY16 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mrps28Q9CY16 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mrps28Q9CY16 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Mrps28Q9CY16 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Mrps28Q9CY16 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.28■□□□□ 0.36
Mrps28Q9CY16 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.28■□□□□ 0.36
Mrps28Q9CY16 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.28■□□□□ 0.36
Mrps28Q9CY16 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mrps28Q9CY16 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mrps28Q9CY16 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mrps28Q9CY16 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Mrps28Q9CY16 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mrps28Q9CY16 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mrps28Q9CY16 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mrps28Q9CY16 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.28■□□□□ 0.36
Mrps28Q9CY16 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Mrps28Q9CY16 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Mrps28Q9CY16 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
Mrps28Q9CY16 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Mrps28Q9CY16 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Mrps28Q9CY16 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Mrps28Q9CY16 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Mrps28Q9CY16 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Mrps28Q9CY16 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.27■□□□□ 0.36
Mrps28Q9CY16 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC17.27■□□□□ 0.36
Mrps28Q9CY16 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Mrps28Q9CY16 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Mrps28Q9CY16 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Mrps28Q9CY16 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Mrps28Q9CY16 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.27■□□□□ 0.36
Mrps28Q9CY16 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Mrps28Q9CY16 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
Mrps28Q9CY16 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Mrps28Q9CY16 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mrps28Q9CY16 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mrps28Q9CY16 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mrps28Q9CY16 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Mrps28Q9CY16 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mrps28Q9CY16 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Mrps28Q9CY16 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Mrps28Q9CY16 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.26■□□□□ 0.35
Mrps28Q9CY16 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.26■□□□□ 0.35
Mrps28Q9CY16 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Mrps28Q9CY16 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mrps28Q9CY16 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mrps28Q9CY16 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Mrps28Q9CY16 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Mrps28Q9CY16 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Mrps28Q9CY16 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Mrps28Q9CY16 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Mrps28Q9CY16 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Mrps28Q9CY16 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.25■□□□□ 0.35
Mrps28Q9CY16 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mrps28Q9CY16 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mrps28Q9CY16 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mrps28Q9CY16 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Mrps28Q9CY16 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Mrps28Q9CY16 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.25■□□□□ 0.35
Mrps28Q9CY16 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Mrps28Q9CY16 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mrps28Q9CY16 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mrps28Q9CY16 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Mrps28Q9CY16 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mrps28Q9CY16 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mrps28Q9CY16 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mrps28Q9CY16 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mrps28Q9CY16 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Mrps28Q9CY16 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mrps28Q9CY16 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Mrps28Q9CY16 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.24■□□□□ 0.35
Mrps28Q9CY16 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.24■□□□□ 0.35
Mrps28Q9CY16 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms