Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
Pfdn1Q9CWM4 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pfdn1Q9CWM4 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.95■□□□□ 0.3
Pfdn1Q9CWM4 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pfdn1Q9CWM4 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pfdn1Q9CWM4 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pfdn1Q9CWM4 AC154454.1-201ENSMUST00000225253 216 ntBASIC16.95■□□□□ 0.3
Pfdn1Q9CWM4 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pfdn1Q9CWM4 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
Pfdn1Q9CWM4 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pfdn1Q9CWM4 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pfdn1Q9CWM4 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pfdn1Q9CWM4 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.95■□□□□ 0.3
Pfdn1Q9CWM4 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pfdn1Q9CWM4 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Pfdn1Q9CWM4 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pfdn1Q9CWM4 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pfdn1Q9CWM4 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pfdn1Q9CWM4 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pfdn1Q9CWM4 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pfdn1Q9CWM4 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pfdn1Q9CWM4 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pfdn1Q9CWM4 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC16.94■□□□□ 0.3
Pfdn1Q9CWM4 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pfdn1Q9CWM4 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pfdn1Q9CWM4 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pfdn1Q9CWM4 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pfdn1Q9CWM4 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC16.94■□□□□ 0.3
Pfdn1Q9CWM4 Gm6627-201ENSMUST00000218299 2386 ntBASIC16.94■□□□□ 0.3
Pfdn1Q9CWM4 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pfdn1Q9CWM4 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pfdn1Q9CWM4 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pfdn1Q9CWM4 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pfdn1Q9CWM4 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Pfdn1Q9CWM4 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Pfdn1Q9CWM4 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pfdn1Q9CWM4 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pfdn1Q9CWM4 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pfdn1Q9CWM4 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pfdn1Q9CWM4 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pfdn1Q9CWM4 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pfdn1Q9CWM4 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pfdn1Q9CWM4 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pfdn1Q9CWM4 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pfdn1Q9CWM4 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pfdn1Q9CWM4 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.92■□□□□ 0.3
Pfdn1Q9CWM4 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pfdn1Q9CWM4 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pfdn1Q9CWM4 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pfdn1Q9CWM4 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pfdn1Q9CWM4 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pfdn1Q9CWM4 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pfdn1Q9CWM4 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pfdn1Q9CWM4 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.91■□□□□ 0.3
Pfdn1Q9CWM4 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pfdn1Q9CWM4 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC16.91■□□□□ 0.3
Pfdn1Q9CWM4 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pfdn1Q9CWM4 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pfdn1Q9CWM4 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Pfdn1Q9CWM4 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pfdn1Q9CWM4 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pfdn1Q9CWM4 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Pfdn1Q9CWM4 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pfdn1Q9CWM4 Gm45364-201ENSMUST00000210883 159 ntBASIC16.91■□□□□ 0.3
Pfdn1Q9CWM4 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pfdn1Q9CWM4 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pfdn1Q9CWM4 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Pfdn1Q9CWM4 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Pfdn1Q9CWM4 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pfdn1Q9CWM4 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pfdn1Q9CWM4 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.91■□□□□ 0.3
Pfdn1Q9CWM4 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.91■□□□□ 0.3
Pfdn1Q9CWM4 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pfdn1Q9CWM4 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pfdn1Q9CWM4 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pfdn1Q9CWM4 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pfdn1Q9CWM4 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Pfdn1Q9CWM4 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC16.9■□□□□ 0.3
Pfdn1Q9CWM4 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC16.9■□□□□ 0.3
Pfdn1Q9CWM4 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pfdn1Q9CWM4 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pfdn1Q9CWM4 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pfdn1Q9CWM4 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pfdn1Q9CWM4 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pfdn1Q9CWM4 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pfdn1Q9CWM4 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Pfdn1Q9CWM4 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pfdn1Q9CWM4 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pfdn1Q9CWM4 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pfdn1Q9CWM4 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pfdn1Q9CWM4 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.89■□□□□ 0.29
Pfdn1Q9CWM4 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Pfdn1Q9CWM4 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC16.89■□□□□ 0.29
Pfdn1Q9CWM4 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Pfdn1Q9CWM4 AC117769.4-201ENSMUST00000225679 685 ntBASIC16.89■□□□□ 0.29
Pfdn1Q9CWM4 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pfdn1Q9CWM4 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pfdn1Q9CWM4 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pfdn1Q9CWM4 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pfdn1Q9CWM4 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 307 ms