Protein–RNA interactions for Protein: Q9CR55

UPF0547 protein C16orf87 homolog, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CR55 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Q9CR55 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Q9CR55 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Q9CR55 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
Q9CR55 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Q9CR55 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Q9CR55 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Q9CR55 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.74■□□□□ 0.43
Q9CR55 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.74■□□□□ 0.43
Q9CR55 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Q9CR55 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Q9CR55 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.73■□□□□ 0.43
Q9CR55 Fst-202ENSMUST00000223640 2612 ntBASIC17.73■□□□□ 0.43
Q9CR55 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Q9CR55 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Q9CR55 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Q9CR55 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Q9CR55 Gm5812-201ENSMUST00000061073 957 ntBASIC17.73■□□□□ 0.43
Q9CR55 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Q9CR55 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Q9CR55 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Q9CR55 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Q9CR55 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Q9CR55 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Q9CR55 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Q9CR55 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Q9CR55 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.72■□□□□ 0.43
Q9CR55 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Q9CR55 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Q9CR55 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Q9CR55 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Q9CR55 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Q9CR55 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Q9CR55 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Q9CR55 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Q9CR55 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Q9CR55 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC17.71■□□□□ 0.43
Q9CR55 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Q9CR55 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Q9CR55 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Q9CR55 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Q9CR55 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.71■□□□□ 0.43
Q9CR55 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Q9CR55 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Q9CR55 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Q9CR55 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Q9CR55 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Q9CR55 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Q9CR55 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Q9CR55 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Q9CR55 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.7■□□□□ 0.42
Q9CR55 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Q9CR55 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Q9CR55 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Q9CR55 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Q9CR55 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Q9CR55 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Q9CR55 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.69■□□□□ 0.42
Q9CR55 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Q9CR55 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Q9CR55 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Q9CR55 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Q9CR55 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Q9CR55 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.69■□□□□ 0.42
Q9CR55 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Q9CR55 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Q9CR55 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Q9CR55 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Q9CR55 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Q9CR55 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Q9CR55 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Q9CR55 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Q9CR55 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Q9CR55 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Q9CR55 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Q9CR55 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Q9CR55 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Q9CR55 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Q9CR55 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Q9CR55 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Q9CR55 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Q9CR55 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Q9CR55 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Q9CR55 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Q9CR55 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Q9CR55 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Q9CR55 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Q9CR55 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Q9CR55 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Q9CR55 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Q9CR55 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Q9CR55 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC17.67■□□□□ 0.42
Q9CR55 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Q9CR55 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
Q9CR55 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Q9CR55 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Q9CR55 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Q9CR55 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Q9CR55 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Q9CR55 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms