Protein–RNA interactions for Protein: Q9CPW3

Mrpl54, 39S ribosomal protein L54, mitochondrial, mousemouse

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl54Q9CPW3 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mrpl54Q9CPW3 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Mrpl54Q9CPW3 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Mrpl54Q9CPW3 Fst-202ENSMUST00000223640 2612 ntBASIC17.08■□□□□ 0.33
Mrpl54Q9CPW3 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Mrpl54Q9CPW3 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.08■□□□□ 0.33
Mrpl54Q9CPW3 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Mrpl54Q9CPW3 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.08■□□□□ 0.32
Mrpl54Q9CPW3 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mrpl54Q9CPW3 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Mrpl54Q9CPW3 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Mrpl54Q9CPW3 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mrpl54Q9CPW3 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mrpl54Q9CPW3 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mrpl54Q9CPW3 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mrpl54Q9CPW3 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Mrpl54Q9CPW3 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mrpl54Q9CPW3 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Mrpl54Q9CPW3 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mrpl54Q9CPW3 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mrpl54Q9CPW3 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Mrpl54Q9CPW3 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mrpl54Q9CPW3 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Mrpl54Q9CPW3 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mrpl54Q9CPW3 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mrpl54Q9CPW3 Gm10620-201ENSMUST00000098379 1332 ntBASIC17.07■□□□□ 0.32
Mrpl54Q9CPW3 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mrpl54Q9CPW3 Gm11687-201ENSMUST00000118911 886 ntBASIC17.07■□□□□ 0.32
Mrpl54Q9CPW3 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mrpl54Q9CPW3 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC17.07■□□□□ 0.32
Mrpl54Q9CPW3 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mrpl54Q9CPW3 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mrpl54Q9CPW3 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mrpl54Q9CPW3 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Mrpl54Q9CPW3 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mrpl54Q9CPW3 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mrpl54Q9CPW3 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Mrpl54Q9CPW3 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC17.06■□□□□ 0.32
Mrpl54Q9CPW3 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.06■□□□□ 0.32
Mrpl54Q9CPW3 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mrpl54Q9CPW3 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mrpl54Q9CPW3 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Mrpl54Q9CPW3 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC17.06■□□□□ 0.32
Mrpl54Q9CPW3 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Mrpl54Q9CPW3 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mrpl54Q9CPW3 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Mrpl54Q9CPW3 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.06■□□□□ 0.32
Mrpl54Q9CPW3 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
Mrpl54Q9CPW3 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mrpl54Q9CPW3 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Mrpl54Q9CPW3 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Mrpl54Q9CPW3 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.05■□□□□ 0.32
Mrpl54Q9CPW3 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mrpl54Q9CPW3 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mrpl54Q9CPW3 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mrpl54Q9CPW3 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mrpl54Q9CPW3 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.05■□□□□ 0.32
Mrpl54Q9CPW3 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Mrpl54Q9CPW3 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC17.05■□□□□ 0.32
Mrpl54Q9CPW3 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mrpl54Q9CPW3 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mrpl54Q9CPW3 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mrpl54Q9CPW3 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mrpl54Q9CPW3 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mrpl54Q9CPW3 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Mrpl54Q9CPW3 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Mrpl54Q9CPW3 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mrpl54Q9CPW3 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mrpl54Q9CPW3 Gm7143-201ENSMUST00000222811 859 ntBASIC17.04■□□□□ 0.32
Mrpl54Q9CPW3 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mrpl54Q9CPW3 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Mrpl54Q9CPW3 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mrpl54Q9CPW3 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Mrpl54Q9CPW3 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mrpl54Q9CPW3 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Mrpl54Q9CPW3 AA386476-201ENSMUST00000098781 1665 ntBASIC17.04■□□□□ 0.32
Mrpl54Q9CPW3 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.03■□□□□ 0.32
Mrpl54Q9CPW3 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Mrpl54Q9CPW3 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mrpl54Q9CPW3 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mrpl54Q9CPW3 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Mrpl54Q9CPW3 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Mrpl54Q9CPW3 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Mrpl54Q9CPW3 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mrpl54Q9CPW3 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Mrpl54Q9CPW3 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Mrpl54Q9CPW3 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.02■□□□□ 0.32
Mrpl54Q9CPW3 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mrpl54Q9CPW3 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mrpl54Q9CPW3 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.02■□□□□ 0.32
Mrpl54Q9CPW3 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mrpl54Q9CPW3 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mrpl54Q9CPW3 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.02■□□□□ 0.32
Mrpl54Q9CPW3 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Mrpl54Q9CPW3 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Mrpl54Q9CPW3 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Mrpl54Q9CPW3 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Mrpl54Q9CPW3 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Mrpl54Q9CPW3 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Mrpl54Q9CPW3 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms