Protein–RNA interactions for Protein: Q99LJ0

Cttnbp2nl, CTTNBP2 N-terminal-like protein, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cttnbp2nlQ99LJ0 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cttnbp2nlQ99LJ0 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cttnbp2nlQ99LJ0 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cttnbp2nlQ99LJ0 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Cttnbp2nlQ99LJ0 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cttnbp2nlQ99LJ0 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cttnbp2nlQ99LJ0 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cttnbp2nlQ99LJ0 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cttnbp2nlQ99LJ0 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cttnbp2nlQ99LJ0 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cttnbp2nlQ99LJ0 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Cttnbp2nlQ99LJ0 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cttnbp2nlQ99LJ0 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cttnbp2nlQ99LJ0 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cttnbp2nlQ99LJ0 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.33■□□□□ 0.69
Cttnbp2nlQ99LJ0 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cttnbp2nlQ99LJ0 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cttnbp2nlQ99LJ0 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.33■□□□□ 0.68
Cttnbp2nlQ99LJ0 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.33■□□□□ 0.68
Cttnbp2nlQ99LJ0 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.33■□□□□ 0.68
Cttnbp2nlQ99LJ0 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cttnbp2nlQ99LJ0 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cttnbp2nlQ99LJ0 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cttnbp2nlQ99LJ0 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cttnbp2nlQ99LJ0 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cttnbp2nlQ99LJ0 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cttnbp2nlQ99LJ0 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Cttnbp2nlQ99LJ0 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Cttnbp2nlQ99LJ0 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Cttnbp2nlQ99LJ0 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.32■□□□□ 0.68
Cttnbp2nlQ99LJ0 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cttnbp2nlQ99LJ0 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cttnbp2nlQ99LJ0 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
Cttnbp2nlQ99LJ0 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cttnbp2nlQ99LJ0 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Cttnbp2nlQ99LJ0 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cttnbp2nlQ99LJ0 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Cttnbp2nlQ99LJ0 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Cttnbp2nlQ99LJ0 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cttnbp2nlQ99LJ0 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cttnbp2nlQ99LJ0 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cttnbp2nlQ99LJ0 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cttnbp2nlQ99LJ0 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.31■□□□□ 0.68
Cttnbp2nlQ99LJ0 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cttnbp2nlQ99LJ0 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cttnbp2nlQ99LJ0 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cttnbp2nlQ99LJ0 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Cttnbp2nlQ99LJ0 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Cttnbp2nlQ99LJ0 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.31■□□□□ 0.68
Cttnbp2nlQ99LJ0 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cttnbp2nlQ99LJ0 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cttnbp2nlQ99LJ0 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Cttnbp2nlQ99LJ0 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cttnbp2nlQ99LJ0 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cttnbp2nlQ99LJ0 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cttnbp2nlQ99LJ0 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cttnbp2nlQ99LJ0 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Cttnbp2nlQ99LJ0 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cttnbp2nlQ99LJ0 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cttnbp2nlQ99LJ0 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cttnbp2nlQ99LJ0 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cttnbp2nlQ99LJ0 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Cttnbp2nlQ99LJ0 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Cttnbp2nlQ99LJ0 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cttnbp2nlQ99LJ0 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Cttnbp2nlQ99LJ0 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cttnbp2nlQ99LJ0 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.3■□□□□ 0.68
Cttnbp2nlQ99LJ0 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cttnbp2nlQ99LJ0 AA386476-201ENSMUST00000098781 1665 ntBASIC19.3■□□□□ 0.68
Cttnbp2nlQ99LJ0 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Cttnbp2nlQ99LJ0 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cttnbp2nlQ99LJ0 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cttnbp2nlQ99LJ0 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cttnbp2nlQ99LJ0 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cttnbp2nlQ99LJ0 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cttnbp2nlQ99LJ0 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Cttnbp2nlQ99LJ0 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cttnbp2nlQ99LJ0 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Cttnbp2nlQ99LJ0 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cttnbp2nlQ99LJ0 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
Cttnbp2nlQ99LJ0 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.29■□□□□ 0.68
Cttnbp2nlQ99LJ0 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cttnbp2nlQ99LJ0 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.29■□□□□ 0.68
Cttnbp2nlQ99LJ0 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cttnbp2nlQ99LJ0 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cttnbp2nlQ99LJ0 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cttnbp2nlQ99LJ0 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.29■□□□□ 0.68
Cttnbp2nlQ99LJ0 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cttnbp2nlQ99LJ0 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cttnbp2nlQ99LJ0 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cttnbp2nlQ99LJ0 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Cttnbp2nlQ99LJ0 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cttnbp2nlQ99LJ0 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cttnbp2nlQ99LJ0 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cttnbp2nlQ99LJ0 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Cttnbp2nlQ99LJ0 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.28■□□□□ 0.68
Cttnbp2nlQ99LJ0 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
Cttnbp2nlQ99LJ0 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.28■□□□□ 0.68
Cttnbp2nlQ99LJ0 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cttnbp2nlQ99LJ0 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms