Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lysmd3Q99LE3 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Lysmd3Q99LE3 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.95■□□□□ 0.78
Lysmd3Q99LE3 Gm38205-201ENSMUST00000192243 258 ntBASIC19.95■□□□□ 0.78
Lysmd3Q99LE3 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.95■□□□□ 0.78
Lysmd3Q99LE3 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.95■□□□□ 0.78
Lysmd3Q99LE3 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lysmd3Q99LE3 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lysmd3Q99LE3 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Lysmd3Q99LE3 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lysmd3Q99LE3 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Lysmd3Q99LE3 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Lysmd3Q99LE3 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Lysmd3Q99LE3 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Lysmd3Q99LE3 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Lysmd3Q99LE3 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Lysmd3Q99LE3 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lysmd3Q99LE3 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Lysmd3Q99LE3 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Lysmd3Q99LE3 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lysmd3Q99LE3 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lysmd3Q99LE3 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.94■□□□□ 0.78
Lysmd3Q99LE3 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Lysmd3Q99LE3 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Lysmd3Q99LE3 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Lysmd3Q99LE3 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Lysmd3Q99LE3 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Lysmd3Q99LE3 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Lysmd3Q99LE3 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.93■□□□□ 0.78
Lysmd3Q99LE3 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Lysmd3Q99LE3 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Lysmd3Q99LE3 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.93■□□□□ 0.78
Lysmd3Q99LE3 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lysmd3Q99LE3 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Lysmd3Q99LE3 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lysmd3Q99LE3 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.92■□□□□ 0.78
Lysmd3Q99LE3 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lysmd3Q99LE3 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Lysmd3Q99LE3 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lysmd3Q99LE3 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.92■□□□□ 0.78
Lysmd3Q99LE3 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Lysmd3Q99LE3 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Lysmd3Q99LE3 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Lysmd3Q99LE3 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Lysmd3Q99LE3 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Lysmd3Q99LE3 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lysmd3Q99LE3 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.91■□□□□ 0.78
Lysmd3Q99LE3 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Lysmd3Q99LE3 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lysmd3Q99LE3 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.91■□□□□ 0.78
Lysmd3Q99LE3 Gm37179-201ENSMUST00000194862 823 ntBASIC19.91■□□□□ 0.78
Lysmd3Q99LE3 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.91■□□□□ 0.78
Lysmd3Q99LE3 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.91■□□□□ 0.78
Lysmd3Q99LE3 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lysmd3Q99LE3 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lysmd3Q99LE3 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lysmd3Q99LE3 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.91■□□□□ 0.78
Lysmd3Q99LE3 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lysmd3Q99LE3 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Lysmd3Q99LE3 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.9■□□□□ 0.78
Lysmd3Q99LE3 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lysmd3Q99LE3 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lysmd3Q99LE3 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lysmd3Q99LE3 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Lysmd3Q99LE3 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
Lysmd3Q99LE3 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lysmd3Q99LE3 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Lysmd3Q99LE3 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Lysmd3Q99LE3 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lysmd3Q99LE3 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Lysmd3Q99LE3 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Lysmd3Q99LE3 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Lysmd3Q99LE3 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Lysmd3Q99LE3 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.89■□□□□ 0.77
Lysmd3Q99LE3 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lysmd3Q99LE3 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.89■□□□□ 0.77
Lysmd3Q99LE3 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Lysmd3Q99LE3 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Lysmd3Q99LE3 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lysmd3Q99LE3 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lysmd3Q99LE3 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.88■□□□□ 0.77
Lysmd3Q99LE3 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.88■□□□□ 0.77
Lysmd3Q99LE3 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lysmd3Q99LE3 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lysmd3Q99LE3 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lysmd3Q99LE3 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.88■□□□□ 0.77
Lysmd3Q99LE3 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lysmd3Q99LE3 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lysmd3Q99LE3 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Lysmd3Q99LE3 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Lysmd3Q99LE3 Gm13146-201ENSMUST00000118508 780 ntBASIC19.87■□□□□ 0.77
Lysmd3Q99LE3 Gm7514-201ENSMUST00000209475 934 ntBASIC19.87■□□□□ 0.77
Lysmd3Q99LE3 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.87■□□□□ 0.77
Lysmd3Q99LE3 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lysmd3Q99LE3 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Lysmd3Q99LE3 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lysmd3Q99LE3 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Lysmd3Q99LE3 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lysmd3Q99LE3 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Lysmd3Q99LE3 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 12.9 ms