Protein–RNA interactions for Protein: Q91Y17

Pcdha2, Protocadherin alpha 2, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha2Q91Y17 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.56■□□□□ 0.88
Pcdha2Q91Y17 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdha2Q91Y17 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.56■□□□□ 0.88
Pcdha2Q91Y17 Gm42642-201ENSMUST00000200683 355 ntBASIC20.56■□□□□ 0.88
Pcdha2Q91Y17 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdha2Q91Y17 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Pcdha2Q91Y17 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdha2Q91Y17 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdha2Q91Y17 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdha2Q91Y17 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdha2Q91Y17 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdha2Q91Y17 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdha2Q91Y17 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
Pcdha2Q91Y17 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdha2Q91Y17 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Pcdha2Q91Y17 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdha2Q91Y17 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.55■□□□□ 0.88
Pcdha2Q91Y17 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.55■□□□□ 0.88
Pcdha2Q91Y17 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdha2Q91Y17 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Pcdha2Q91Y17 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdha2Q91Y17 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
Pcdha2Q91Y17 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdha2Q91Y17 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdha2Q91Y17 Gm13146-201ENSMUST00000118508 780 ntBASIC20.54■□□□□ 0.88
Pcdha2Q91Y17 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdha2Q91Y17 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Pcdha2Q91Y17 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdha2Q91Y17 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdha2Q91Y17 Gm26571-201ENSMUST00000181399 666 ntBASIC20.54■□□□□ 0.88
Pcdha2Q91Y17 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.54■□□□□ 0.88
Pcdha2Q91Y17 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.54■□□□□ 0.88
Pcdha2Q91Y17 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.54■□□□□ 0.88
Pcdha2Q91Y17 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdha2Q91Y17 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdha2Q91Y17 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdha2Q91Y17 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
Pcdha2Q91Y17 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdha2Q91Y17 Gm10849-201ENSMUST00000100397 618 ntBASIC20.53■□□□□ 0.88
Pcdha2Q91Y17 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdha2Q91Y17 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdha2Q91Y17 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdha2Q91Y17 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdha2Q91Y17 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.53■□□□□ 0.88
Pcdha2Q91Y17 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
Pcdha2Q91Y17 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdha2Q91Y17 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.52■□□□□ 0.88
Pcdha2Q91Y17 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.52■□□□□ 0.88
Pcdha2Q91Y17 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.52■□□□□ 0.88
Pcdha2Q91Y17 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdha2Q91Y17 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdha2Q91Y17 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdha2Q91Y17 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdha2Q91Y17 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.52■□□□□ 0.88
Pcdha2Q91Y17 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdha2Q91Y17 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdha2Q91Y17 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Pcdha2Q91Y17 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdha2Q91Y17 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdha2Q91Y17 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdha2Q91Y17 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdha2Q91Y17 Gm42778-201ENSMUST00000199644 553 ntBASIC20.51■□□□□ 0.87
Pcdha2Q91Y17 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.51■□□□□ 0.87
Pcdha2Q91Y17 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdha2Q91Y17 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdha2Q91Y17 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdha2Q91Y17 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.51■□□□□ 0.87
Pcdha2Q91Y17 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdha2Q91Y17 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdha2Q91Y17 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdha2Q91Y17 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Pcdha2Q91Y17 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdha2Q91Y17 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.5■□□□□ 0.87
Pcdha2Q91Y17 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdha2Q91Y17 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.5■□□□□ 0.87
Pcdha2Q91Y17 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.5■□□□□ 0.87
Pcdha2Q91Y17 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdha2Q91Y17 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdha2Q91Y17 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdha2Q91Y17 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
Pcdha2Q91Y17 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdha2Q91Y17 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.49■□□□□ 0.87
Pcdha2Q91Y17 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdha2Q91Y17 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdha2Q91Y17 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdha2Q91Y17 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdha2Q91Y17 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdha2Q91Y17 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdha2Q91Y17 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdha2Q91Y17 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdha2Q91Y17 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdha2Q91Y17 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdha2Q91Y17 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdha2Q91Y17 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.48■□□□□ 0.87
Pcdha2Q91Y17 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.48■□□□□ 0.87
Pcdha2Q91Y17 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdha2Q91Y17 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdha2Q91Y17 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdha2Q91Y17 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdha2Q91Y17 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms