Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb3Q91XZ7 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb3Q91XZ7 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.12■□□□□ 0.65
Pcdhb3Q91XZ7 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb3Q91XZ7 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb3Q91XZ7 Ddx41-204ENSMUST00000224765 2199 ntBASIC19.12■□□□□ 0.65
Pcdhb3Q91XZ7 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.12■□□□□ 0.65
Pcdhb3Q91XZ7 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdhb3Q91XZ7 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhb3Q91XZ7 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhb3Q91XZ7 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Pcdhb3Q91XZ7 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Pcdhb3Q91XZ7 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhb3Q91XZ7 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhb3Q91XZ7 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
Pcdhb3Q91XZ7 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhb3Q91XZ7 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdhb3Q91XZ7 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhb3Q91XZ7 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhb3Q91XZ7 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhb3Q91XZ7 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhb3Q91XZ7 Gm9847-201ENSMUST00000052528 599 ntBASIC19.1■□□□□ 0.65
Pcdhb3Q91XZ7 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdhb3Q91XZ7 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhb3Q91XZ7 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhb3Q91XZ7 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhb3Q91XZ7 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Pcdhb3Q91XZ7 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhb3Q91XZ7 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhb3Q91XZ7 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhb3Q91XZ7 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhb3Q91XZ7 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Pcdhb3Q91XZ7 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhb3Q91XZ7 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhb3Q91XZ7 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdhb3Q91XZ7 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdhb3Q91XZ7 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Pcdhb3Q91XZ7 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdhb3Q91XZ7 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdhb3Q91XZ7 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdhb3Q91XZ7 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdhb3Q91XZ7 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdhb3Q91XZ7 Gm12922-201ENSMUST00000120626 809 ntBASIC19.08■□□□□ 0.64
Pcdhb3Q91XZ7 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhb3Q91XZ7 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhb3Q91XZ7 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhb3Q91XZ7 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhb3Q91XZ7 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdhb3Q91XZ7 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Pcdhb3Q91XZ7 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Pcdhb3Q91XZ7 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Pcdhb3Q91XZ7 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhb3Q91XZ7 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhb3Q91XZ7 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhb3Q91XZ7 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.07■□□□□ 0.64
Pcdhb3Q91XZ7 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhb3Q91XZ7 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.07■□□□□ 0.64
Pcdhb3Q91XZ7 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.07■□□□□ 0.64
Pcdhb3Q91XZ7 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhb3Q91XZ7 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdhb3Q91XZ7 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
Pcdhb3Q91XZ7 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhb3Q91XZ7 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.06■□□□□ 0.64
Pcdhb3Q91XZ7 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhb3Q91XZ7 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhb3Q91XZ7 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhb3Q91XZ7 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhb3Q91XZ7 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhb3Q91XZ7 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhb3Q91XZ7 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhb3Q91XZ7 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
Pcdhb3Q91XZ7 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.06■□□□□ 0.64
Pcdhb3Q91XZ7 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhb3Q91XZ7 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhb3Q91XZ7 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Pcdhb3Q91XZ7 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Pcdhb3Q91XZ7 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhb3Q91XZ7 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.05■□□□□ 0.64
Pcdhb3Q91XZ7 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhb3Q91XZ7 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhb3Q91XZ7 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhb3Q91XZ7 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhb3Q91XZ7 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC19.05■□□□□ 0.64
Pcdhb3Q91XZ7 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb3Q91XZ7 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb3Q91XZ7 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb3Q91XZ7 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb3Q91XZ7 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19.04■□□□□ 0.64
Pcdhb3Q91XZ7 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb3Q91XZ7 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb3Q91XZ7 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.04■□□□□ 0.64
Pcdhb3Q91XZ7 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb3Q91XZ7 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb3Q91XZ7 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.04■□□□□ 0.64
Pcdhb3Q91XZ7 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb3Q91XZ7 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhb3Q91XZ7 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhb3Q91XZ7 BC021767-201ENSMUST00000126387 1716 ntBASIC19.03■□□□□ 0.64
Pcdhb3Q91XZ7 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.03■□□□□ 0.64
Pcdhb3Q91XZ7 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 87.5 ms