Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
Pcdhb4Q91XZ6 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Pcdhb4Q91XZ6 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhb4Q91XZ6 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhb4Q91XZ6 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhb4Q91XZ6 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhb4Q91XZ6 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhb4Q91XZ6 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhb4Q91XZ6 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhb4Q91XZ6 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhb4Q91XZ6 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhb4Q91XZ6 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhb4Q91XZ6 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhb4Q91XZ6 Gm10209-201ENSMUST00000203397 1607 ntBASIC19■□□□□ 0.63
Pcdhb4Q91XZ6 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhb4Q91XZ6 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhb4Q91XZ6 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhb4Q91XZ6 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19■□□□□ 0.63
Pcdhb4Q91XZ6 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhb4Q91XZ6 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhb4Q91XZ6 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19■□□□□ 0.63
Pcdhb4Q91XZ6 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhb4Q91XZ6 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Pcdhb4Q91XZ6 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhb4Q91XZ6 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb4Q91XZ6 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb4Q91XZ6 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Pcdhb4Q91XZ6 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb4Q91XZ6 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb4Q91XZ6 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb4Q91XZ6 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.99■□□□□ 0.63
Pcdhb4Q91XZ6 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb4Q91XZ6 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhb4Q91XZ6 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhb4Q91XZ6 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhb4Q91XZ6 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Pcdhb4Q91XZ6 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.98■□□□□ 0.63
Pcdhb4Q91XZ6 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhb4Q91XZ6 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhb4Q91XZ6 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhb4Q91XZ6 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhb4Q91XZ6 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhb4Q91XZ6 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Pcdhb4Q91XZ6 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
Pcdhb4Q91XZ6 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.97■□□□□ 0.63
Pcdhb4Q91XZ6 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb4Q91XZ6 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb4Q91XZ6 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb4Q91XZ6 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb4Q91XZ6 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb4Q91XZ6 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb4Q91XZ6 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
Pcdhb4Q91XZ6 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb4Q91XZ6 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb4Q91XZ6 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb4Q91XZ6 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb4Q91XZ6 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb4Q91XZ6 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb4Q91XZ6 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.96■□□□□ 0.63
Pcdhb4Q91XZ6 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb4Q91XZ6 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb4Q91XZ6 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb4Q91XZ6 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb4Q91XZ6 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb4Q91XZ6 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb4Q91XZ6 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.95■□□□□ 0.62
Pcdhb4Q91XZ6 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
Pcdhb4Q91XZ6 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb4Q91XZ6 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb4Q91XZ6 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb4Q91XZ6 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Pcdhb4Q91XZ6 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb4Q91XZ6 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Pcdhb4Q91XZ6 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb4Q91XZ6 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb4Q91XZ6 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb4Q91XZ6 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb4Q91XZ6 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb4Q91XZ6 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb4Q91XZ6 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.94■□□□□ 0.62
Pcdhb4Q91XZ6 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Pcdhb4Q91XZ6 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb4Q91XZ6 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb4Q91XZ6 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb4Q91XZ6 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.94■□□□□ 0.62
Pcdhb4Q91XZ6 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Pcdhb4Q91XZ6 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
Pcdhb4Q91XZ6 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb4Q91XZ6 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.94■□□□□ 0.62
Pcdhb4Q91XZ6 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb4Q91XZ6 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb4Q91XZ6 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.93■□□□□ 0.62
Pcdhb4Q91XZ6 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb4Q91XZ6 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.93■□□□□ 0.62
Pcdhb4Q91XZ6 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.93■□□□□ 0.62
Pcdhb4Q91XZ6 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb4Q91XZ6 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.93■□□□□ 0.62
Pcdhb4Q91XZ6 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.93■□□□□ 0.62
Pcdhb4Q91XZ6 Gm43137-201ENSMUST00000198052 594 ntBASIC18.93■□□□□ 0.62
Pcdhb4Q91XZ6 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms