Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb8Q91XZ2 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb8Q91XZ2 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb8Q91XZ2 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.7■□□□□ 0.58
Pcdhb8Q91XZ2 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb8Q91XZ2 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb8Q91XZ2 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Pcdhb8Q91XZ2 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb8Q91XZ2 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb8Q91XZ2 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhb8Q91XZ2 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Pcdhb8Q91XZ2 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb8Q91XZ2 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Pcdhb8Q91XZ2 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb8Q91XZ2 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb8Q91XZ2 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb8Q91XZ2 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb8Q91XZ2 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.69■□□□□ 0.58
Pcdhb8Q91XZ2 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb8Q91XZ2 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.69■□□□□ 0.58
Pcdhb8Q91XZ2 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb8Q91XZ2 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb8Q91XZ2 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhb8Q91XZ2 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb8Q91XZ2 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb8Q91XZ2 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.68■□□□□ 0.58
Pcdhb8Q91XZ2 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb8Q91XZ2 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb8Q91XZ2 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb8Q91XZ2 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Pcdhb8Q91XZ2 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Pcdhb8Q91XZ2 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb8Q91XZ2 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhb8Q91XZ2 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
Pcdhb8Q91XZ2 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.68■□□□□ 0.58
Pcdhb8Q91XZ2 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.68■□□□□ 0.58
Pcdhb8Q91XZ2 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.68■□□□□ 0.58
Pcdhb8Q91XZ2 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
Pcdhb8Q91XZ2 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb8Q91XZ2 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb8Q91XZ2 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb8Q91XZ2 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb8Q91XZ2 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb8Q91XZ2 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb8Q91XZ2 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb8Q91XZ2 Gm8493-201ENSMUST00000196881 489 ntBASIC18.67■□□□□ 0.58
Pcdhb8Q91XZ2 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb8Q91XZ2 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
Pcdhb8Q91XZ2 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb8Q91XZ2 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb8Q91XZ2 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb8Q91XZ2 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhb8Q91XZ2 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb8Q91XZ2 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.66■□□□□ 0.58
Pcdhb8Q91XZ2 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb8Q91XZ2 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb8Q91XZ2 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Pcdhb8Q91XZ2 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb8Q91XZ2 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb8Q91XZ2 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb8Q91XZ2 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb8Q91XZ2 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdhb8Q91XZ2 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb8Q91XZ2 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb8Q91XZ2 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb8Q91XZ2 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb8Q91XZ2 Gm43173-201ENSMUST00000202246 593 ntBASIC18.65■□□□□ 0.58
Pcdhb8Q91XZ2 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb8Q91XZ2 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb8Q91XZ2 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb8Q91XZ2 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb8Q91XZ2 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdhb8Q91XZ2 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Pcdhb8Q91XZ2 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Pcdhb8Q91XZ2 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.64■□□□□ 0.57
Pcdhb8Q91XZ2 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb8Q91XZ2 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb8Q91XZ2 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb8Q91XZ2 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb8Q91XZ2 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
Pcdhb8Q91XZ2 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.64■□□□□ 0.57
Pcdhb8Q91XZ2 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Pcdhb8Q91XZ2 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb8Q91XZ2 Smad6-203ENSMUST00000179458 273 ntBASIC18.64■□□□□ 0.57
Pcdhb8Q91XZ2 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb8Q91XZ2 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb8Q91XZ2 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.64■□□□□ 0.57
Pcdhb8Q91XZ2 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb8Q91XZ2 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb8Q91XZ2 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb8Q91XZ2 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdhb8Q91XZ2 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Pcdhb8Q91XZ2 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb8Q91XZ2 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb8Q91XZ2 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Pcdhb8Q91XZ2 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Pcdhb8Q91XZ2 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdhb8Q91XZ2 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Pcdhb8Q91XZ2 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.63■□□□□ 0.57
Pcdhb8Q91XZ2 Gm45417-201ENSMUST00000209533 758 ntBASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms